RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 OR52P1PQ8NH57 321 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 FAM3CQ92520 227 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TBX5Q99593 518 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TSC22D4Q9Y3Q8 395 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CPED1A4D0V7 1026 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ACOX3O15254 700 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 FOXD2O60548 495 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM150AQ86TG1 271 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 KLHDC8BQ8IXV7 354 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 OR8J1Q8NGP2 316 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 HTRA1Q92743 480 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 MGLLQ99685 303 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TNFRSF10DQ9UBN6 386 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 EBF1Q9UH73 591 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ANTXRLA6NF34 631 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 JUNDP17535 347 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 RPS3AP61247 264 aaKnown RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 IRF4Q15306 451 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ANKRD54Q6NXT1 300 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ZSCAN1Q8NBB4 408 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 OR5K2Q8NHB8 316 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ACTL8Q9H568 366 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 POLR1DQ9Y2S0 133 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 FAAHO00519 579 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 PGRMC2O15173 223 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ARRB1P49407 418 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 IHHQ14623 411 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TBC1D25Q3MII6 688 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SLC30A6Q6NXT4 461 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 FIGNL1Q6PIW4 674 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CXXC5Q7LFL8 322 aaKnown RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 RABEPKQ7Z6M1 372 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 RBCK1Q9BYM8 510 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 MCOLN1Q9GZU1 580 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 NLGN3Q9NZ94 848 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 UBR3Q6ZT12 1888 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TFECO14948 347 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 CDKN2CP42773 168 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 TUBA1BP68363 451 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 PYDC2Q56P42 97 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 HMBOX1Q6NT76 420 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 TUBA1AQ71U36 451 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 TRIM73Q86UV7 250 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 PHOSPHO1Q8TCT1 267 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 DOK4Q8TEW6 326 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM203Q969S6 136 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 MED31Q9Y3C7 131 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 KCNK5O95279 499 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ALPLP05186 524 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 CLDN2P57739 230 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 PIN1Q13526 163 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 RPE65Q16518 533 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 LRIF1Q5T3J3 769 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ARMCX6Q7L4S7 300 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 GRHL3Q8TE85 626 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 MMABQ96EY8 250 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 GFRA2O00451 464 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 DGAT2Q96PD7 388 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 SLC6A16Q9GZN6 736 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 NMNAT1Q9HAN9 279 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 FOXE1O00358 373 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 NUDT7P0C024 238 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OSMP13725 252 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF24P17028 368 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 GPX2P18283 190 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 CERS1P27544 350 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 POLR2IP36954 125 aaKnown RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 HHEXQ03014 270 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 NDUFA5Q16718 116 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 SLC27A4Q6P1M0 643 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ADAMTSL4Q6UY14 1074 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OAFQ86UD1 273 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 VN1R2Q8NFZ6 395 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OR52E4Q8NGH9 312 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 KCNS3Q9BQ31 491 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ADAM29Q9UKF5 820 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 DOCK3Q8IZD9 2030 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OR9Q2Q8NGE9 314 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OR5D16Q8NGK9 328 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 SERINC2Q96SA4 455 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 TEX10Q9NXF1 929 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 PXNP49023 591 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 RPS26P11Q5JNZ5 115 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF554Q86TJ5 538 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF761Q86XN6 746 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 RPLP0P6Q8NHW5 317 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM80Q96HE8 168 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ATG2BQ96BY7 2078 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 SLC1A7O00341 560 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 PROX2Q3B8N5 592 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 FGD2Q7Z6J4 655 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OR10H4Q8NGA5 316 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 SUN3Q8TAQ9 357 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 COQ10AQ96MF6 247 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF385DQ9H6B1 395 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 RNF6Q9Y252 685 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ADAMTSL1Q8N6G6 1762 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 A8MUA0 341 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms