RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 GDPD3Q7L5L3 318 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 SPRED2Q7Z698 418 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 FGD2Q7Z6J4 655 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 AMIGO1Q86WK6 493 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 PTRH1Q86Y79 214 aaKnown RBP6.18□□□□□ -1.42
HMG20A-201ENST00000336216 TMEFF1Q8IYR6 380 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 OR8H3Q8N146 312 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 TRAM1L1Q8N609 369 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 TEX26Q8N6G2 289 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 TCEANCQ8N8B7 351 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 FAM98AQ8NCA5 519 aaKnown RBP6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF548Q8NEK5 533 aaPredicted RBP6.18□□□□□ -1.42
HMG20A-201ENST00000336216 OR8J3Q8NGG0 315 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF563Q8TA94 476 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF480Q8WV37 535 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 CHFRQ96EP1 664 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 SLC12A9Q9BXP2 914 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 SLC29A3Q9BZD2 475 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 OR2B2Q9GZK3 357 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 VNN3Q9NY84 501 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 MKLN1Q9UL63 735 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 CPED1A4D0V7 1026 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ISPDA4D126 451 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 IGLV3-25P01717 112 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 CHRNB1P11230 501 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 AHCYP23526 432 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 SOX3P41225 446 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 CLCN7P51798 805 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 METAP1P53582 386 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 PPP2R2BQ00005 443 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF45Q02386 682 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 MVKQ03426 396 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 SLAMF1Q13291 335 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 BTBD16Q32M84 506 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 RPS26P11Q5JNZ5 115 aaPredicted RBP6.18□□□□□ -1.42
HMG20A-201ENST00000336216 C10orf62Q5T681 223 aaPredicted RBP6.18□□□□□ -1.42
HMG20A-201ENST00000336216 LIPKQ5VXJ0 399 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF776Q68DI1 518 aaPredicted RBP6.18□□□□□ -1.42
HMG20A-201ENST00000336216 SBSNQ6UWP8 590 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 OR9Q2Q8NGE9 314 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 DYNC2LI1Q8TCX1 351 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 PIK3R3Q92569 461 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 RIPOR3Q96MK2 946 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 TEFMQ96QE5 360 aaKnown RBP6.18□□□□□ -1.42
HMG20A-201ENST00000336216 GPR174Q9BXC1 333 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ABCG4Q9H172 646 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 REEP4Q9H6H4 257 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 BEX1Q9HBH7 125 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 IL1RAPQ9NPH3 570 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 DCAF13Q9NV06 445 aaKnown RBP6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF224Q9NZL3 707 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 SNX7Q9UNH6 387 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 CFL2Q9Y281 166 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 TRPM7Q96QT4 1865 aa6.18□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF318Q5VUA4 2279 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 IGLV3-10A0A075B6K4 115 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 FAM172BPA6NC97 362 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 I3L521 148 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 WWP2O00308 870 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 KMOO15229 486 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PCDHGA12O60330 932 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 OR5F1O95221 314 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CYP17A1P05093 508 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CDKN2CP42773 168 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 TGM4P49221 684 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ATP12AP54707 1039 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CLDN8P56748 225 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 UGT8Q16880 541 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 TRIM71Q2Q1W2 868 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CCDC58Q4VC31 144 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 COQ5Q5HYK3 327 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 FAM78AQ5JUQ0 283 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CPZQ66K79 652 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 HSDL2Q6YN16 418 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PRSS48Q7RTY5 328 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 IZUMO1Q8IYV9 350 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SLC5A8Q8N695 610 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ZFP41Q8N8Y5 198 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SRFBP1Q8NEF9 429 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 GPR150Q8NGU9 434 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SNAPC3Q92966 411 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 HOXD1Q9GZZ0 328 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 TM9SF3Q9HD45 589 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 KRCC1Q9NPI7 259 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 STARD5Q9NSY2 213 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 MAPRE3Q9UPY8 281 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 RWDD3Q9Y3V2 267 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 MKI67P46013 3256 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PLXNA1Q9UIW2 1896 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 OR6C74A6NCV1 312 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PRR23D1E9PI22 279 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SMLR1H3BR10 107 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 OR7A17O14581 309 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ABLIM3O94929 683 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SLITRK5O94991 958 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PTHP01270 115 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PRR23D2P0DMB1 279 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 MYL9P24844 172 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 TIA1P31483 386 aaKnown RBP eCLIP6.17□□□□□ -1.421e-6■■□□□ 13
HMG20A-201ENST00000336216 CRISP3P54108 245 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms