RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 WDR53Q7Z5U6 358 aaPredicted RBP22.14■■□□□ 1.14
NDEL1-201ENST00000334527 KLHL6Q8WZ60 621 aa22.14■■□□□ 1.14
NDEL1-201ENST00000334527 KLHL25Q9H0H3 589 aa22.14■■□□□ 1.14
NDEL1-201ENST00000334527 NT5DC2Q9H857 520 aa22.14■■□□□ 1.14
NDEL1-201ENST00000334527 ACSS1Q9NUB1 689 aaPredicted RBP22.14■■□□□ 1.14
NDEL1-201ENST00000334527 NDOR1Q9UHB4 597 aa22.14■■□□□ 1.14
NDEL1-201ENST00000334527 DLGAP3O95886 979 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 CKMT1AP12532 417 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 CSTF2P33240 577 aaKnown RBP eCLIP22.14■■□□□ 1.13
NDEL1-201ENST00000334527 IL12RB1P42701 662 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 FAM78AQ5JUQ0 283 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 FAM46CQ5VWP2 391 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 C12orf76Q8N812 135 aaPredicted RBP22.14■■□□□ 1.13
NDEL1-201ENST00000334527 LINC01555Q8NAE3 123 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 SLC7A13Q8TCU3 470 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 XAGE5Q8WWM1 108 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 SMG7Q92540 1137 aaKnown RBP22.14■■□□□ 1.13
NDEL1-201ENST00000334527 SLC35G5Q96KT7 338 aa22.14■■□□□ 1.13
NDEL1-201ENST00000334527 TRNT1Q96Q11 434 aaKnown RBP22.14■■□□□ 1.13
NDEL1-201ENST00000334527 PPM1DO15297 605 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 GPX5O75715 221 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 UGT2B17O75795 530 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 EPHX1P07099 455 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 GPC1P35052 558 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 TMED10P49755 219 aaKnown RBP22.13■■□□□ 1.13
NDEL1-201ENST00000334527 PIN1Q13526 163 aaPredicted RBP22.13■■□□□ 1.13
NDEL1-201ENST00000334527 WSCD2Q2TBF2 565 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 TMEM201Q5SNT2 666 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 PIP5KL1Q5T9C9 394 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 OR4C11Q6IEV9 310 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 SLC34A3Q8N130 599 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 CACTIN-AS1Q8N1I8 211 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 RAB7BQ96AH8 199 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 KCNS3Q9BQ31 491 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 C17orf62Q9BQA9 187 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 TRPC4Q9UBN4 977 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 CLEC2DQ9UHP7 191 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 ACAD8Q9UKU7 415 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 TBC1D3BA6NDS4 549 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 M0R3H8 397 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 SCG5P05408 212 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 NR2F1P10589 423 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 SOX3P41225 446 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 SMIM11AP58511 58 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 RHAGQ02094 409 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 MEDAGQ5VYS4 303 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 COMTD1Q86VU5 262 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 ZNF764Q96H86 408 aaPredicted RBP22.13■■□□□ 1.13
NDEL1-201ENST00000334527 TMEM80Q96HE8 168 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 DPH7Q9BTV6 452 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 PITHD1Q9GZP4 211 aaPredicted RBP22.13■■□□□ 1.13
NDEL1-201ENST00000334527 NUAK2Q9H093 628 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 MIR1-1HGQ9H1L0 117 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 GLIPR2Q9H4G4 154 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 MVB12BQ9H7P6 319 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 DDX31Q9H8H2 851 aaKnown RBP22.13■■□□□ 1.13
NDEL1-201ENST00000334527 HHATLQ9HCP6 504 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 PRSS16Q9NQE7 514 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 ADAM29Q9UKF5 820 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 LSM2Q9Y333 95 aaKnown RBP22.13■■□□□ 1.13
NDEL1-201ENST00000334527 CAB39Q9Y376 341 aaPredicted RBP22.13■■□□□ 1.13
NDEL1-201ENST00000334527 GPC6Q9Y625 555 aaPredicted RBP22.13■■□□□ 1.13
NDEL1-201ENST00000334527 C5orf42Q9H799 3197 aa22.13■■□□□ 1.13
NDEL1-201ENST00000334527 CACNB4O00305 520 aaPredicted RBP22.12■■□□□ 1.13
NDEL1-201ENST00000334527 HAT1O14929 419 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 MAGP20916 626 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 CD72P21854 359 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 SSR2P43308 183 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 GSTM5P46439 218 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 CSNK1G2P78368 415 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 SPANXN2Q5MJ10 180 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 BCDIN3DQ7Z5W3 292 aaKnown RBP22.12■■□□□ 1.13
NDEL1-201ENST00000334527 OTUB1Q96FW1 271 aaPredicted RBP22.12■■□□□ 1.13
NDEL1-201ENST00000334527 FERD3LQ96RJ6 166 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 FUZQ9BT04 418 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 A4GNTQ9UNA3 340 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 PCDHGB6Q9Y5F9 930 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 WASHC1A8K0Z3 465 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 KMOO15229 486 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.12■■□□□ 1.13
NDEL1-201ENST00000334527 NDUFAF5Q5TEU4 345 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 WASH2PQ6VEQ5 465 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.12■■□□□ 1.13
NDEL1-201ENST00000334527 OLIG3Q7RTU3 272 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 TCEANCQ8N8B7 351 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 AMDHD1Q96NU7 426 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 CNPPD1Q9BV87 410 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 KCNK12Q9HB15 430 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 EXOSC4Q9NPD3 245 aaKnown RBP22.12■■□□□ 1.13
NDEL1-201ENST00000334527 ZCCHC3Q9NUD5 404 aaKnown RBP22.12■■□□□ 1.13
NDEL1-201ENST00000334527 WDR37Q9Y2I8 494 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 RPL36Q9Y3U8 105 aaKnown RBP22.12■■□□□ 1.13
NDEL1-201ENST00000334527 OR1A2Q9Y585 309 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 NUMA1Q14980 2115 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 COL4A3Q01955 1670 aa22.12■■□□□ 1.13
NDEL1-201ENST00000334527 A0A0A6YYD5 115 aa22.11■■□□□ 1.13
NDEL1-201ENST00000334527 TPST2O60704 377 aa22.11■■□□□ 1.13
NDEL1-201ENST00000334527 CSO75390 466 aaKnown RBP22.11■■□□□ 1.13
NDEL1-201ENST00000334527 NME6O75414 186 aaPredicted RBP22.11■■□□□ 1.13
NDEL1-201ENST00000334527 PTTG1O95997 202 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms