RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 HBA1P69905 142 aa15.46■□□□□ 0.07
SHOX-201ENST00000334060 DUSP8Q13202 625 aa15.46■□□□□ 0.07
SHOX-201ENST00000334060 CAPRIN1Q14444 709 aaKnown RBP15.46■□□□□ 0.07
SHOX-201ENST00000334060 OR52E8Q6IFG1 317 aa15.46■□□□□ 0.07
SHOX-201ENST00000334060 WDR53Q7Z5U6 358 aaPredicted RBP15.46■□□□□ 0.07
SHOX-201ENST00000334060 MSRB3Q8IXL7 192 aa15.46■□□□□ 0.07
SHOX-201ENST00000334060 DTNBP1Q96EV8 351 aa15.46■□□□□ 0.07
SHOX-201ENST00000334060 MAGED4Q96JG8 741 aa15.46■□□□□ 0.07
SHOX-201ENST00000334060 OR52E6Q96RD3 313 aa15.46■□□□□ 0.07
SHOX-201ENST00000334060 ALOXE3Q9BYJ1 711 aa15.46■□□□□ 0.07
SHOX-201ENST00000334060 SIRT3Q9NTG7 399 aaPredicted RBP15.46■□□□□ 0.07
SHOX-201ENST00000334060 DXOO77932 396 aaKnown RBP15.45■□□□□ 0.06
SHOX-201ENST00000334060 CPSF4O95639 269 aaKnown RBP15.45■□□□□ 0.06
SHOX-201ENST00000334060 DRD2P14416 443 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 PTPN6P29350 595 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 KIR3DL1P43629 444 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 OCA2Q04671 838 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 TRMT12Q53H54 448 aaKnown RBP15.45■□□□□ 0.06
SHOX-201ENST00000334060 AMDHD1Q96NU7 426 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 CRB3Q9BUF7 120 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 FAIM2Q9BWQ8 316 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 TGIF2Q9GZN2 237 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 SLC26A1Q9H2B4 701 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 CXorf36Q9H7Y0 433 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 PACSIN3Q9UKS6 424 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 CCDC154A6NI56 674 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 CTNSO60931 367 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 DCTN3O75935 186 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 GPR75O95800 540 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 CPMP14384 443 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 LIFP15018 202 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 S100A3P33764 101 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 NCBP2P52298 156 aaKnown RBP eCLIP15.45■□□□□ 0.06
SHOX-201ENST00000334060 EEF1A2Q05639 463 aaKnown RBP15.45■□□□□ 0.06
SHOX-201ENST00000334060 BNIP1Q12981 228 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 CLN3Q13286 438 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 DNASE1L3Q13609 305 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 NSDHLQ15738 373 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 REP15Q6BDI9 236 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 TMEM107Q6UX40 140 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 OR4K14Q8NGD5 310 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 GTF2H4Q92759 462 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 OR1F2PQ96R84 312 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 IKZF5Q9H5V7 419 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 PNO1Q9NRX1 252 aaKnown RBP15.45■□□□□ 0.06
SHOX-201ENST00000334060 MS4A12Q9NXJ0 267 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 SLC25A37Q9NYZ2 338 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 TCFL5Q9UL49 500 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 MSRB2Q9Y3D2 182 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 LRRC42Q9Y546 428 aa15.45■□□□□ 0.06
SHOX-201ENST00000334060 MYO1GB0I1T2 1018 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 PDPK1O15530 556 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 KCNK10P57789 538 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 MGAT2Q10469 447 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 SELPLGQ14242 412 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 EXOSC7Q15024 291 aaKnown RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 TBC1D25Q3MII6 688 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 CAMKMTQ7Z624 323 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 ZNF595Q8IYB9 648 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 IL22RA1Q8N6P7 574 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 OR7G2Q8NG99 324 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 OR8J2Q8NGG1 315 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 WDR77Q9BQA1 342 aaPredicted RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 DTX4Q9Y2E6 619 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 HS3ST3B1Q9Y662 390 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 FXYD1O00168 92 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 AIM2O14862 343 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 EFSO43281 561 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 HEXBP07686 556 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 SNRPB2P08579 225 aaKnown RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 CCNYL3P0C7X3 344 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 PCSK2P16519 638 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 HOXB9P17482 250 aaPredicted RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 TLX1P31314 330 aaPredicted RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 MC3RP41968 323 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 FRKP42685 505 aaPredicted RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 RPS26P62854 115 aaKnown RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 IGLV3-21P80748 117 aaPredicted RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 STX4Q12846 297 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 QSOX2Q6ZRP7 698 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 ANKRD37Q7Z713 158 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 ESX1Q8N693 406 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 FBXO30Q8TB52 745 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 PNPT1Q8TCS8 783 aaKnown RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 PTPMT1Q8WUK0 201 aaPredicted RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 PRDM9Q9NQV7 894 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 THSD1Q9NS62 852 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 TAS2R7Q9NYW3 318 aa15.44■□□□□ 0.06
SHOX-201ENST00000334060 GPN3Q9UHW5 284 aaPredicted RBP15.44■□□□□ 0.06
SHOX-201ENST00000334060 A0A1W2PRB8 838 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 TCRBV16S1A1N1A0A5B0 115 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 C1QTNF9BB2RNN3 333 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 SEC24DO94855 1032 aaPredicted RBP15.43■□□□□ 0.06
SHOX-201ENST00000334060 C1QTNF9P0C862 333 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 SSTR4P31391 388 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 OTX2P32243 289 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 PGDP52209 483 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 EMP2P54851 167 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 HSD17B7P56937 341 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 CYLC2Q14093 348 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms