RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RPS26P11Q5JNZ5 115 aaPredicted RBP15.04■□□□□ -0
PDGFB-201ENST00000331163 ERMP1Q7Z2K6 904 aa15.04■□□□□ -0
PDGFB-201ENST00000331163 TMEM126BQ8IUX1 230 aa15.04■□□□□ -0
PDGFB-201ENST00000331163 ADGRF3Q8IZF5 1079 aa15.04■□□□□ -0
PDGFB-201ENST00000331163 CAPSLQ8WWF8 208 aa15.04■□□□□ -0
PDGFB-201ENST00000331163 HTRA1Q92743 480 aa15.04■□□□□ -0
PDGFB-201ENST00000331163 USP7Q93009 1102 aa15.04■□□□□ -0
PDGFB-201ENST00000331163 TMEM184CQ9NVA4 438 aa15.04■□□□□ -0
PDGFB-201ENST00000331163 ZNF451Q9Y4E5 1061 aa15.04■□□□□ -0
PDGFB-201ENST00000331163 CXCR6O00574 342 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 TNFRSF10CO14798 259 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 OPRL1P41146 370 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 CCT3P49368 545 aaKnown RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 VASPP50552 380 aaPredicted RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 ZNF362Q5T0B9 420 aaPredicted RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 C6orf132Q5T0Z8 1188 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 PPP4R4Q6NUP7 873 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 EPHX4Q8IUS5 362 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 OR9A2Q8NGT5 310 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 GTF2H4Q92759 462 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 MSANTD3Q96H12 275 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 MUS81Q96NY9 551 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 TEFMQ96QE5 360 aaKnown RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 MARCH7Q9H992 704 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 RNF215Q9Y6U7 377 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 CFAP54Q96N23 3096 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 BBIP1A8MTZ0 92 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 M0QX08 132 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 ACPPP15309 386 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 POU3F3P20264 500 aaPredicted RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 ACADVLP49748 655 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 GRIK2Q13002 908 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 ZNF267Q14586 743 aaPredicted RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 SF3A2Q15428 464 aaKnown RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 GPR68Q15743 365 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 DUOXA1Q1HG43 343 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 FAM98BQ52LJ0 330 aaKnown RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 WDR20Q8TBZ3 569 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 NRBF2Q96F24 287 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 PTCHD1Q96NR3 888 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 QRSL1Q9H0R6 528 aaKnown RBP15.03■□□□□ -0
PDGFB-201ENST00000331163 RAD21L1Q9H4I0 556 aa15.03■□□□□ -0
PDGFB-201ENST00000331163 SCAMP2O15127 329 aaKnown RBP15.02■□□□□ -0
PDGFB-201ENST00000331163 DUX1O43812 170 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 PIAS2O75928 621 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 CSF2P04141 144 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 NR2F6P10588 404 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 POLR2IP36954 125 aaKnown RBP15.02■□□□□ -0
PDGFB-201ENST00000331163 LSSP48449 732 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 ARHGAP40Q5TG30 622 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 TRIM46Q7Z4K8 759 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 OXR1Q8N573 874 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 SRFBP1Q8NEF9 429 aaKnown RBP15.02■□□□□ -0
PDGFB-201ENST00000331163 UBTD2Q8WUN7 234 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 CCDC74AQ96AQ1 378 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 C9orf16Q9BUW7 83 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 KCMF1Q9P0J7 381 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 APC2O95996 2303 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 CDC14CA4D256 554 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 CST1P01037 141 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 RPLP0P05388 317 aaKnown RBP15.02■□□□□ -0
PDGFB-201ENST00000331163 OR12D1P0DN82 309 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 HIST1H1TP22492 207 aaPredicted RBP15.02■□□□□ -0
PDGFB-201ENST00000331163 ANXA8L1Q5VT79 327 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 ATG16L2Q8NAA4 619 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 GATSQ8NAP1 163 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 GPR151Q8TDV0 419 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 ADAMTS15Q8TE58 950 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 POT1Q9NUX5 634 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 TESMINQ9Y4I5 508 aa15.02■□□□□ -0
PDGFB-201ENST00000331163 MDC1Q14676 2089 aaKnown RBP15.02□□□□□ -0.01
PDGFB-201ENST00000331163 LRIT2A6NDA9 550 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 P2RX6O15547 441 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 NOBOXO60393 691 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 GUCY1B2O75343 617 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 NUDT14O95848 222 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 C8BP07358 591 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 MC3RP41968 323 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 MLLT10P55197 1068 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 ARHGAP19Q14CB8 494 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 EXOSC7Q15024 291 aaKnown RBP15.02□□□□□ -0.01
PDGFB-201ENST00000331163 MOGQ16653 247 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 GLB1L3Q8NCI6 653 aaPredicted RBP15.02□□□□□ -0.01
PDGFB-201ENST00000331163 TANKQ92844 425 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 ZBED6CLQ96FA7 236 aaPredicted RBP15.02□□□□□ -0.01
PDGFB-201ENST00000331163 COL21A1Q96P44 957 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 MS4A8Q9BY19 250 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.02□□□□□ -0.01
PDGFB-201ENST00000331163 SPRTNQ9H040 489 aaPredicted RBP15.02□□□□□ -0.01
PDGFB-201ENST00000331163 SIAEQ9HAT2 523 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 POU2F3Q9UKI9 436 aa15.02□□□□□ -0.01
PDGFB-201ENST00000331163 NPIPA5A0A0B4J1W7 369 aa15.01□□□□□ -0.01
PDGFB-201ENST00000331163 IGHV5-51A0A0C4DH38 117 aa15.01□□□□□ -0.01
PDGFB-201ENST00000331163 OR5K3A6NET4 321 aa15.01□□□□□ -0.01
PDGFB-201ENST00000331163 NPIPA7E9PJI5 369 aa15.01□□□□□ -0.01
PDGFB-201ENST00000331163 SIGLEC6O43699 453 aa15.01□□□□□ -0.01
PDGFB-201ENST00000331163 HS6ST1O60243 411 aa15.01□□□□□ -0.01
PDGFB-201ENST00000331163 SNRNP200O75643 2136 aaKnown RBP15.01□□□□□ -0.01
PDGFB-201ENST00000331163 NPIPA8P0DM63 369 aa15.01□□□□□ -0.01
PDGFB-201ENST00000331163 RPS9P46781 194 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms