RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PTPN5P54829 565 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 WNT4P56705 351 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 TAS2R50P59544 299 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 UBE3AQ05086 875 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 PRSS53Q2L4Q9 553 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 TYW3Q6IPR3 259 aaKnown RBP13.72□□□□□ -0.21
SNX20-202ENST00000330943 REEP3Q6NUK4 255 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 TMEM173Q86WV6 379 aaPredicted RBP13.72□□□□□ -0.21
SNX20-202ENST00000330943 WDR48Q8TAF3 677 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 ASZ1Q8WWH4 475 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 SCRN2Q96FV2 425 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 LRR1Q96L50 414 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 NARFLQ9H6Q4 476 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 DIABLOQ9NR28 239 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 ISM1B1AKI9 464 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 C5orf58C9J3I9 102 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 ORC5O43913 435 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 TGFB1P01137 390 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 HLA-DQB1P01920 261 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 H1F0P07305 194 aaKnown RBP13.72□□□□□ -0.21
SNX20-202ENST00000330943 NR2F6P10588 404 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 ZNF30P17039 623 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 HMGA1P17096 107 aaKnown RBP13.72□□□□□ -0.21
SNX20-202ENST00000330943 WEE1P30291 646 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 TAF12Q16514 161 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 OCLNQ16625 522 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 SYT14P1Q58G82 188 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 RNLSQ5VYX0 342 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 PGBD2Q6P3X8 592 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 TNFAIP8L2Q6P589 184 aaPredicted RBP13.72□□□□□ -0.21
SNX20-202ENST00000330943 FBXO22Q8NEZ5 403 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 OR8H1Q8NGG4 311 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 NEIL2Q969S2 332 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 LYSMD1Q96S90 227 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 OR51B5Q9H339 312 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 GPBP1L1Q9HC44 474 aaPredicted RBP13.72□□□□□ -0.21
SNX20-202ENST00000330943 PRELID1Q9Y255 219 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 FRMPD3Q5JV73 1810 aa13.72□□□□□ -0.21
SNX20-202ENST00000330943 CEP290O15078 2479 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 ZNF821O75541 412 aaPredicted RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 NCR1O76036 304 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 FAM157BP0CG42 384 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 DDX5P17844 614 aaKnown RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 POU3F3P20264 500 aaPredicted RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 PRKACBP22694 351 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 PREPP48147 710 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 MAPK12P53778 367 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 ABATP80404 500 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 FABP5Q01469 135 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 MPPE1Q53F39 396 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 TOR2AQ5JU69 321 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 KIAA1841Q6NSI8 718 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 TCTN3Q6NUS6 607 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 MED27Q6P2C8 311 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 TMCO2Q7Z6W1 182 aaPredicted RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 MMP21Q8N119 569 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 SLC37A3Q8NCC5 494 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 GPR32P1Q8NGA4 272 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNX20-202ENST00000330943 APOBEC4Q8WW27 367 aaKnown RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 OMA1Q96E52 524 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 MED18Q9BUE0 208 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 KCNN3Q9UGI6 736 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 GSTK1Q9Y2Q3 226 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 H7C4K7 107 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 FAAHO00519 579 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 ADAMTS4O75173 837 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 AVPR1BP47901 424 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 CSNK1DP48730 415 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 TRIM71Q2Q1W2 868 aaKnown RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 ZNF57Q68EA5 555 aaPredicted RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 QSOX2Q6ZRP7 698 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 LILRA3Q8N6C8 439 aaPredicted RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 OR2AP1Q8NGE2 309 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 C16orf78Q8WTQ4 265 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 C2orf15Q8WU43 125 aaKnown RBP13.71□□□□□ -0.21
SNX20-202ENST00000330943 SOCS4Q8WXH5 440 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 SEMA3GQ9NS98 782 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 PCDHGB7Q9Y5F8 929 aa13.71□□□□□ -0.21
SNX20-202ENST00000330943 SEPT4O43236 478 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 IMPA1P29218 277 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 OR1D2P34982 312 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
SNX20-202ENST00000330943 SYTL3Q4VX76 610 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 LMNTD1Q8N9Z9 388 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 TMEM163Q8TC26 289 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 OVCA2Q8WZ82 227 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 AKAP1Q92667 903 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNX20-202ENST00000330943 UFD1Q92890 307 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 SCAMP4Q969E2 229 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 ZNF582Q96NG8 517 aaPredicted RBP13.7□□□□□ -0.22
SNX20-202ENST00000330943 SLC22A12Q96S37 553 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 MARVELD1Q9BSK0 173 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 WACQ9BTA9 647 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 RSPO3Q9BXY4 272 aaPredicted RBP13.7□□□□□ -0.22
SNX20-202ENST00000330943 PAK6Q9NQU5 681 aaPredicted RBP13.7□□□□□ -0.22
SNX20-202ENST00000330943 SF3B6Q9Y3B4 125 aaKnown RBP13.7□□□□□ -0.22
SNX20-202ENST00000330943 B8ZZF3 427 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 INMT-MINDY4F8WBC2 141 aa13.7□□□□□ -0.22
SNX20-202ENST00000330943 PLOD3O60568 738 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms