RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ESYT3A0FGR9 886 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 ZNF860A6NHJ4 632 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 PIAS1O75925 651 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 STATHP02808 62 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 UQCRHP07919 91 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 HIST1H1TP22492 207 aaPredicted RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 ATP5A1P25705 553 aaKnown RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 PTX3P26022 381 aaPredicted RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 MSH2P43246 934 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 CLCN2P51788 898 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 GPR143P51810 404 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 LIM2P55344 173 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 RAB8AP61006 207 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 RBPJQ06330 500 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 FXNQ16595 210 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 AP5B1Q2VPB7 878 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 C18orf21Q32NC0 220 aaPredicted RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 ZNF766Q5HY98 468 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 DEPDC1Q5TB30 811 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 MROH9Q5TGP6 573 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 KHDRBS2Q5VWX1 349 aaKnown RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 RPS19BP1Q86WX3 136 aaKnown RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 CRLF3Q8IUI8 442 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 IFT20Q8IY31 132 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 BEST3Q8N1M1 668 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 NOA1Q8NC60 698 aaKnown RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 CATSPER1Q8NEC5 780 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 OR14A16Q8NHC5 309 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 ACMSDQ8TDX5 336 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 KCTD4Q8WVF5 259 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 TANKQ92844 425 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 TSLPQ969D9 159 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 RGMAQ96B86 450 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 CCDC120Q96HB5 630 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 ART5Q96L15 291 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 C5orf34Q96MH7 638 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 PAFAH2Q99487 392 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 NPAS2Q99743 824 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 MRPL57Q9BQC6 102 aaKnown RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 DMRT3Q9NQL9 472 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 NECTIN3Q9NQS3 549 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 LYARQ9NX58 379 aaKnown RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 ADAM29Q9UKF5 820 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 STK38LQ9Y2H1 464 aa5.9□□□□□ -1.46
SMG1-201ENST00000330588 KLF13Q9Y2Y9 288 aaPredicted RBP5.9□□□□□ -1.46
SMG1-201ENST00000330588 SPTA1P02549 2419 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 GABRR3A8MPY1 467 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 H3BQF6 201 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 H3BS24 57 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 UBXN8O00124 270 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 NME2P1O60361 137 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 B4GALT2O60909 372 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 CDC123O75794 336 aaPredicted RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 CELA2AP08217 269 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 GSTA1P08263 222 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 SNRPAP09012 282 aaKnown RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 GFAPP14136 432 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 CD53P19397 219 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 AGAP20933 346 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 MAOAP21397 527 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 TNFRSF8P28908 595 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 TLX1P31314 330 aaPredicted RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 CYB561P49447 251 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 HLCSP50747 726 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 BTG2P78543 158 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 MRPL49Q13405 166 aaKnown RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 GTF2H2Q13888 395 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 RASA2Q15283 850 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 OR1C1Q15619 314 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 OR4C11Q6IEV9 310 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 GTF2H2CQ6P1K8 395 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 Q6ZPB1 254 aaPredicted RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 GOLGA7Q7Z5G4 137 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 KRT77Q7Z794 578 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 DND1Q8IYX4 353 aaKnown RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 SLC34A3Q8N130 599 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 EID3Q8N140 333 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 SPATA6LQ8N4H0 392 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 SLC15A4Q8N697 577 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 ACOT4Q8N9L9 421 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 WDR20Q8TBZ3 569 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 DCAKDQ8WVC6 231 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 CCT6BQ92526 530 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 DHRS1Q96LJ7 313 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 TAAR6Q96RI8 345 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 SERPINI1Q99574 410 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 CCDC77Q9BR77 488 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 ASPNQ9BXN1 380 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 SHCBP1LQ9BZQ2 653 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 MRPL46Q9H2W6 279 aaKnown RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 DDX31Q9H8H2 851 aaKnown RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMG1-201ENST00000330588 CHCHD3Q9NX63 227 aaKnown RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 LUZP4Q9P127 313 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 ZNF835Q9Y2P0 537 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 YARS2Q9Y2Z4 477 aaKnown RBP5.89□□□□□ -1.47
SMG1-201ENST00000330588 ANGPTL3Q9Y5C1 460 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 CFAP46Q8IYW2 2715 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 A0A0A6YYD5 115 aa5.89□□□□□ -1.47
SMG1-201ENST00000330588 IGHV3-20A0A0C4DH32 117 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms