RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DEFA3P59666 94 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 SPHARQ15513 63 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF658BQ4V348 819 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 IKBIPQ70UQ0 350 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 RSPRY1Q96DX4 576 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 TREX2Q9BQ50 279 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 TSSK6Q9BXA6 273 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 OR51I1Q9H343 314 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 DPEP2Q9H4A9 486 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 IMP3Q9NV31 184 aaKnown RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 CFL2Q9Y281 166 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 C1QTNF3-AMACRE9PGA6 284 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 HMGN4O00479 90 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 EPHX1P07099 455 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 BSGP35613 385 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 MAGEA8P43361 318 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 CCR8P51685 355 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 HTRA4P83105 476 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ELOAQ14241 798 aaKnown RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 KRT33BQ14525 404 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 IRF3Q14653 427 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF750Q32MQ0 723 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 LCTLQ6UWM7 567 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 PDZD3Q86UT5 571 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 Q8N9G6 341 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 FERD3LQ96RJ6 166 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF607Q96SK3 696 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 FNDC11Q9BVV2 318 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 CDCA4Q9BXL8 241 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 MS4A8Q9BY19 250 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 QRSL1Q9H0R6 528 aaKnown RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 MTIF3Q9H2K0 278 aaKnown RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 CPNE5Q9HCH3 593 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 OR1A2Q9Y585 309 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 KLK4Q9Y5K2 254 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 EDDM13A0A1B0GTR0 161 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 SH3D21A4FU49 640 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 IGLON5A6NGN9 336 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 ADAP00813 363 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 RPS19P39019 145 aaKnown RBP13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 HNRNPA1L2Q32P51 320 aaKnown RBP13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 SAXO2Q658L1 398 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 RTL10Q7L3V2 364 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 GDPD3Q7L5L3 318 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 ZBED6CLQ96FA7 236 aaPredicted RBP13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 OPALINQ96PE5 141 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 BBS4Q96RK4 519 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 SP140LQ9H930 580 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 EQTNQ9NQ60 294 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 CCDC59Q9P031 241 aaKnown RBP13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 MARK1Q9P0L2 795 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 HELZP42694 1942 aaKnown RBP13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 HAT1O14929 419 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 MYL12BO14950 172 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 LCMT2O60294 686 aaKnown RBP13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC35G4P0C7Q5 338 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 ACP5P13686 325 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 PTNP21246 168 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 NR4A2P43354 598 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 GSTM5P46439 218 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 ELAVL3Q14576 367 aaKnown RBP13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF234Q14588 700 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 TAB1Q15750 504 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF770Q6IQ21 691 aaPredicted RBP13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 TUBA3EQ6PEY2 450 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 NUDT13Q86X67 352 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 GANCQ8TET4 914 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 KLHL3Q9UH77 587 aa13.31□□□□□ -0.28
ATP2C1-201ENST00000328560 NDUFS4O43181 175 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 PSMA1P25786 263 aaKnown RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 TNFSF8P32971 234 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF91Q05481 1191 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 PRKCDQ05655 676 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 LASP1Q14847 261 aaKnown RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 ERN2Q76MJ5 926 aaKnown RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 ATCAYQ86WG3 371 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 OR9Q1Q8NGQ5 310 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 TMEM80Q96HE8 168 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC35G5Q96KT7 338 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC30A2Q9BRI3 323 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF717Q9BY31 904 aaPredicted RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 ANKRA2Q9H9E1 313 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 HHATLQ9HCP6 504 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 TOR4AQ9NXH8 423 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 CNOT2Q9NZN8 540 aaKnown RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 REV1Q9UBZ9 1251 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 MGAT4BQ9UQ53 548 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 CARD8Q9Y2G2 431 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 KLHL20Q9Y2M5 609 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 MYO10Q9HD67 2058 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 HEPACAM2A8MVW5 462 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 KMOO15229 486 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 FRS3O43559 492 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 CSO75390 466 aaKnown RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 PDE9AO76083 593 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 RB1P06400 928 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 CXCR2P25025 360 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 NCBP2P52298 156 aaKnown RBP eCLIP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms