RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 METTL27Q8N6F8 245 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 FAM47BQ8NA70 645 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 OR5T3Q8NGG3 340 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 FAM110BQ8TC76 370 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 FAM162AQ96A26 154 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 YY1AP1Q9H869 796 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 TEX10Q9NXF1 929 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 ASB4Q9Y574 426 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 B3GALT2O43825 422 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 RDH16O75452 317 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 KCNK5O95279 499 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 TIAF1O95411 115 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 ZNF26P17031 533 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 ZNF10P21506 573 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 HBA1P69905 142 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 FAM53BQ14153 422 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 SLC9A5Q14940 896 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 TTLL10Q6ZVT0 673 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 CTRCQ99895 268 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 MAPKAP1Q9BPZ7 522 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 STRADBQ9C0K7 418 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 DCAF13Q9NV06 445 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 TAS2R9Q9NYW1 312 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 DHCR7Q9UBM7 475 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 FBXW2Q9UKT8 454 aa17.68■□□□□ 0.42
EXOSC3-201ENST00000327304 A0A1W2PRB8 838 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 CDK4P11802 303 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 NOVA1P51513 510 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 CHRNB3Q05901 458 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 ATP6AP1Q15904 470 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 VMACQ2NL98 169 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 FAM214AQ32MH5 1076 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 INTS11Q5TA45 600 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 PWWP2BQ6NUJ5 590 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 EID3Q8N140 333 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 RNF145Q96MT1 663 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 DEPDC7Q96QD5 511 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 SEPHS2Q99611 448 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 NDC1Q9BTX1 674 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 CHID1Q9BWS9 393 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 C8orf4Q9NR00 106 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 RAB26Q9ULW5 256 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 LOXL2Q9Y4K0 774 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 ATG4BQ9Y4P1 393 aa17.67■□□□□ 0.42
EXOSC3-201ENST00000327304 PMS2P1A4D2B8 440 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 TMX2-CTNND1H3BSU7 103 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 C6orf47O95873 294 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 CEACAM1P13688 526 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 DRD2P14416 443 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 EFNA1P20827 205 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 MC2RQ01718 297 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 GAB1Q13480 694 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 VEZF1Q14119 521 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 ZZZ3Q8IYH5 903 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 PACRGLQ8N7B6 248 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 UCN3Q969E3 161 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 NCLNQ969V3 563 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 PMEPA1Q969W9 287 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 CIDECQ96AQ7 238 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 NR1H4Q96RI1 486 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 CMKLR1Q99788 373 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 CHST8Q9H2A9 424 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 MAGIXQ9H6Y5 334 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 COQ10BQ9H8M1 238 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 LYARQ9NX58 379 aaKnown RBP17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 TAS2R7Q9NYW3 318 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 KCMF1Q9P0J7 381 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 NDOR1Q9UHB4 597 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 CLCA2Q9UQC9 943 aa17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 TMEM184BQ9Y519 407 aaPredicted RBP17.66■□□□□ 0.42
EXOSC3-201ENST00000327304 A0A1W2PR48 441 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 TPST1O60507 370 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 PRKRAO75569 313 aaKnown RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 NSA2O95478 260 aaKnown RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 FGF5P12034 268 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 ITIH1P19827 911 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 ALAS2P22557 587 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 FRKP42685 505 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 LIM2P55344 173 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 RGNQ15493 299 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 PRSS53Q2L4Q9 553 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 PPP4R4Q6NUP7 873 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 PPP1R3BQ86XI6 285 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 CA13Q8N1Q1 262 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 LIN37Q96GY3 246 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 RAD21L1Q9H4I0 556 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 Q9H521 79 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 EHD3Q9NZN3 535 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 AKAP7Q9P0M2 348 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 HCN3Q9P1Z3 774 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 CDV3Q9UKY7 258 aaKnown RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 DAPP1Q9UN19 280 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 A0A1W2PNU3 283 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 B4E171 279 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 POLR1CO15160 346 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 GUCY1B2O75343 617 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 SCRG1O75711 98 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 AIFM1O95831 613 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 LDLRP01130 860 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 ATXN8OSP0DMR3 200 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms