RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TIMM50Q3ZCQ8 353 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 PLAG1Q6DJT9 500 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 BHLHB9Q6PI77 547 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 LINC00471Q8N535 108 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 AMER3Q8N944 861 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 SFXN5Q8TD22 340 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 NXF2Q9GZY0 626 aaKnown RBP21.16■□□□□ 0.98
PNKP-201ENST00000322344 BCL2L10Q9HD36 194 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 MRPS30Q9NP92 439 aaKnown RBP21.16■□□□□ 0.98
PNKP-201ENST00000322344 FZD3Q9NPG1 666 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 DZANK1Q9NVP4 752 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 ZFR2Q9UPR6 939 aaKnown RBP21.16■□□□□ 0.98
PNKP-201ENST00000322344 IFT52Q9Y366 437 aa21.16■□□□□ 0.98
PNKP-201ENST00000322344 ALPK3Q96L96 1907 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 A0A1W2PP55 124 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 TAF4O00268 1085 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 ZW10O43264 779 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 PAK4O96013 591 aaPredicted RBP21.15■□□□□ 0.98
PNKP-201ENST00000322344 RPS21P63220 83 aaKnown RBP21.15■□□□□ 0.98
PNKP-201ENST00000322344 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.15■□□□□ 0.98
PNKP-201ENST00000322344 FGL2Q14314 439 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 SEC23BQ15437 767 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 SYPL1Q16563 259 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 TMEM201Q5SNT2 666 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 PERM1Q5SV97 790 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 MEDAGQ5VYS4 303 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 ZNF793Q6ZN11 406 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 NLGN4XQ8N0W4 816 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 VANGL1Q8TAA9 524 aaPredicted RBP21.15■□□□□ 0.98
PNKP-201ENST00000322344 BBS4Q96RK4 519 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 FUZQ9BT04 418 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 BTBD1Q9H0C5 482 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 XKR8Q9H6D3 395 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 SLC25A19Q9HC21 320 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 ZCCHC3Q9NUD5 404 aaKnown RBP21.15■□□□□ 0.98
PNKP-201ENST00000322344 SERGEFQ9UGK8 458 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 SLC6A14Q9UN76 642 aa21.15■□□□□ 0.98
PNKP-201ENST00000322344 MAN2B1O00754 1011 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 SEMA7AO75326 666 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 UGT2B17O75795 530 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 CA3P07451 260 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 PORP16435 677 aaPredicted RBP21.14■□□□□ 0.98
PNKP-201ENST00000322344 NCBP2P52298 156 aaKnown RBP eCLIP21.14■□□□□ 0.982e-9■■■■□ 25.4
PNKP-201ENST00000322344 LIMK1P53667 647 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 CRISP3P54108 245 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 SGCGQ13326 291 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 C12orf73Q69YU5 71 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 XAGE5Q8WWM1 108 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 MOAP1Q96BY2 351 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 C1QTNF2Q9BXJ5 285 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 RSPO3Q9BXY4 272 aaPredicted RBP21.14■□□□□ 0.98
PNKP-201ENST00000322344 TRPC4Q9UBN4 977 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 KCNK6Q9Y257 313 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 SLC17A4Q9Y2C5 497 aa21.14■□□□□ 0.98
PNKP-201ENST00000322344 A0A0G2JN53 185 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 FAM227AF5H4B4 570 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 AHRP35869 848 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 BCL6P41182 706 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 XKP51811 444 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 ERVK-21P61565 698 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 IFITM3Q01628 133 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 ALDH6A1Q02252 535 aaKnown RBP21.14■□□□□ 0.97
PNKP-201ENST00000322344 ZNF776Q68DI1 518 aaPredicted RBP21.14■□□□□ 0.97
PNKP-201ENST00000322344 PGBD2Q6P3X8 592 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 OR4D11Q8NGI4 311 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 AICDAQ9GZX7 198 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 RACGAP1Q9H0H5 632 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 C11orf16Q9NQ32 467 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 SLC9A8Q9Y2E8 581 aa21.14■□□□□ 0.97
PNKP-201ENST00000322344 C2orf16Q68DN1 1984 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 PLXND1Q9Y4D7 1925 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 PRAMEF27A3QJZ7 478 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 PRR19A6NJB7 356 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 KDM1AO60341 852 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 CEACAM5P06731 702 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 FOXD4Q12950 439 aaPredicted RBP21.13■□□□□ 0.97
PNKP-201ENST00000322344 C2orf27AQ580R0 203 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 C19orf48Q6RUI8 117 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 CASP12Q6UXS9 341 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 SZRD1Q7Z422 152 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 UCN3Q969E3 161 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 MS4A6EQ96DS6 147 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 CHFRQ96EP1 664 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 SARGQ9BW04 601 aa21.13■□□□□ 0.97
PNKP-201ENST00000322344 POLR2J3Q9H1A7 115 aaKnown RBP21.13■□□□□ 0.97
PNKP-201ENST00000322344 A0A1W2PRQ8 180 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 SAGE2PA6NJ88 616 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 HIST1H1TP22492 207 aaPredicted RBP21.12■□□□□ 0.97
PNKP-201ENST00000322344 GRK5P34947 590 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 COX10Q12887 443 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 SLAMF1Q13291 335 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 NDUFA9Q16795 377 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 LEXMQ3ZCV2 418 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 MRM1Q6IN84 353 aaKnown RBP21.12■□□□□ 0.97
PNKP-201ENST00000322344 RBM45Q8IUH3 476 aaKnown RBP21.12■□□□□ 0.97
PNKP-201ENST00000322344 LACC1Q8IV20 430 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 SRFBP1Q8NEF9 429 aaKnown RBP21.12■□□□□ 0.97
PNKP-201ENST00000322344 OR52E1Q8NGJ3 308 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 MGLLQ99685 303 aa21.12■□□□□ 0.97
PNKP-201ENST00000322344 C1QTNF7Q9BXJ2 289 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms