RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NLGN4XQ8N0W4 816 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 KIF2BQ8N4N8 673 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 RNF148Q8N7C7 305 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 RBM15BQ8NDT2 890 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 VPS37AQ8NEZ2 397 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 NLGN4YQ8NFZ3 816 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 FBXO30Q8TB52 745 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 ZNF681Q96N22 645 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 OR1F2PQ96R84 312 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 RMND5AQ9H871 391 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 ASCL3Q9NQ33 180 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 VAPAQ9P0L0 249 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 PCDHGB4Q9UN71 923 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 CLDN16Q9Y5I7 305 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 RAD1O60671 282 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 KCNH1O95259 989 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 PORP16435 677 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 TNNI3P19429 210 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 CSNK2A2P19784 350 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 F8A1P23610 371 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 MPIP34949 423 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 DLSTP36957 453 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 ID4P47928 161 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 PCBP4P57723 403 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 MTPNP58546 118 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 RHAGQ02094 409 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 BNIP1Q12981 228 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 SRSF6Q13247 344 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 SPDYE7PQ495Y7 208 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 MRPL14Q6P1L8 145 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 FAM111BQ6SJ93 734 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 WDR53Q7Z5U6 358 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 CAMKMTQ7Z624 323 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 ZBED6CLQ96FA7 236 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 RBM18Q96H35 190 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 CXorf36Q9H7Y0 433 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 EFCAB1Q9HAE3 211 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 EQTNQ9NQ60 294 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 FAM120CQ9NX05 1096 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 WBP11Q9Y2W2 641 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 PCDHB14Q9Y5E9 798 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 LOC101059948A0A1B0GTJ6 334 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 MASP2O00187 686 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 RNASET2O00584 256 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 CTNSO60931 367 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 UNC5CO95185 931 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 RECKO95980 971 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 CT62P0C5K7 136 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 HSD17B7P56937 341 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 RPS26P62854 115 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 TRMT12Q53H54 448 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 ANXA8L1Q5VT79 327 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 FAM91A1Q658Y4 838 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 VASH2Q86V25 355 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 ADAMTS18Q8TE60 1221 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 ITCHQ96J02 903 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 DGAT2Q96PD7 388 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 CNPPD1Q9BV87 410 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 SPRY4Q9C004 299 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 PRDM9Q9NQV7 894 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 CDRT15L2A8MXV6 281 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 ALOX12BO75342 701 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 KLF7O75840 302 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 EEF1A2Q05639 463 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 TP53BP2Q13625 1128 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 SELPLGQ14242 412 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 EXOSC7Q15024 291 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 RABL3Q5HYI8 236 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 ZNF517Q6ZMY9 492 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 SCUBE1Q8IWY4 988 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 ESX1Q8N693 406 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 PCYOX1LQ8NBM8 494 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 LRFN5Q96NI6 719 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 YIPF4Q9BSR8 244 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 TAS2R9Q9NYW1 312 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 SLC25A37Q9NYZ2 338 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 MAPRE3Q9UPY8 281 aa14.42□□□□□ -0.1
PDLIM5-202ENST00000318007 BBIP1A8MTZ0 92 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 MYO1GB0I1T2 1018 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 PRKNO60260 465 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 PRDX6P30041 224 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 EMP2P54851 167 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 IRX1P78414 480 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 DLEU7Q6UYE1 221 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 QSOX2Q6ZRP7 698 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 DEFB107AQ8IZN7 70 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 RIT1Q92963 219 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 LRRC58Q96CX6 371 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 DPH2Q9BQC3 489 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 SLC35A5Q9BS91 424 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 PAIP1Q9H074 479 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 IKZF5Q9H5V7 419 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 THSD1Q9NS62 852 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 TAS2R7Q9NYW3 318 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 GMPR2Q9P2T1 348 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 NUP210LQ5VU65 1888 aa14.41□□□□□ -0.1
PDLIM5-202ENST00000318007 IGLV3-12A0A075B6K2 115 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 RNF103-CHMP3A0A140T963 221 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms