RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SDC3O75056 442 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 FURINP09958 794 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 IL9P15248 144 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 FEN1P39748 380 aaKnown RBP7.21□□□□□ -1.25
TRIM55-202ENST00000315962 SSR2P43308 183 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 MAPK9P45984 424 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 DAB2P98082 770 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 ID2Q02363 134 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 SRSF11Q05519 484 aaKnown RBP7.21□□□□□ -1.25
TRIM55-202ENST00000315962 PRDX1Q06830 199 aaKnown RBP7.21□□□□□ -1.25
TRIM55-202ENST00000315962 LRRC74AQ0VAA2 488 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 TAB1Q15750 504 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 ALG11Q2TAA5 492 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 LRIT3Q3SXY7 679 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 PRRT3Q5FWE3 981 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 C18orf63Q68DL7 685 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 PTOV1Q86YD1 416 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 ARMC8Q8IUR7 673 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 IQCF2Q8IXL9 164 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 LAS2Q8IYD9 372 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 KRT78Q8N1N4 520 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 GOLM1Q8NBJ4 401 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 VPS37AQ8NEZ2 397 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 PJA1Q8NG27 643 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 CXorf40BQ96DE9 158 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 YIPF6Q96EC8 236 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 PYURFQ96I23 114 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 NECTIN4Q96NY8 510 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 OR2M4Q96R27 311 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 RHBGQ9H310 441 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 MUC13Q9H3R2 512 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 SRMSQ9H3Y6 488 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 REEP4Q9H6H4 257 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 LMAN1LQ9HAT1 526 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 BRF2Q9HAW0 419 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 SLC6A20Q9NP91 592 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 TMEM74BQ9NUR3 256 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 RLIMQ9NVW2 624 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 ACSL5Q9ULC5 683 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 B3GNT3Q9Y2A9 372 aa7.21□□□□□ -1.25
TRIM55-202ENST00000315962 NUP210Q8TEM1 1887 aaPredicted RBP7.21□□□□□ -1.25
TRIM55-202ENST00000315962 A0A1W2PRB8 838 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 DYTNA2CJ06 578 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 OR6C74A6NCV1 312 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 OR2W5A6NFC9 320 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 FAM227AF5H4B4 570 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 WBP4O75554 376 aaKnown RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 NPPAP01160 153 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 CTSBP07858 339 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 STSP08842 583 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 DRD1P21728 446 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 PTX3P26022 381 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 TGFBR2P37173 567 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 PRIM2P49643 509 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 GZMMP51124 257 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 CRYBA2P53672 197 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 MANFP55145 182 aaKnown RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 SRP54P61011 504 aaKnown RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 RPP38P78345 283 aaKnown RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 GPR18Q14330 331 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 RGNQ15493 299 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 PUS10Q3MIT2 529 aaKnown RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 LRIF1Q5T3J3 769 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 DEPDC1Q5TB30 811 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 NXNL2Q5VZ03 156 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 KIAA1161Q6NSJ0 714 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 ZNF793Q6ZN11 406 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 VASH1Q7L8A9 365 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 UBE3DQ7Z6J8 389 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 AMIGO1Q86WK6 493 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 SIMC1Q8NDZ2 872 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 OR8J2Q8NGG1 315 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 OR5D16Q8NGK9 328 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 REPS1Q96D71 796 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 ARSGQ96EG1 525 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 HSH2DQ96JZ2 352 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 PHOX2BQ99453 314 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 ZNF717Q9BY31 904 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 EQTNQ9NQ60 294 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 PLSCR3Q9NRY6 295 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 SCN3BQ9NY72 215 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 ANKMY1Q9P2S6 941 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 CTDSP2O14595 271 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 SLC22A1O15245 554 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 MBTPS2O43462 519 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 HCRTR1O43613 425 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 TPST2O60704 377 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 RPN2P04844 631 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 MYF5P13349 255 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 HNRNPA2B1P22626 353 aaKnown RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 CERS1P27544 350 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 SERPINB10P48595 397 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 MRPL19P49406 292 aaKnown RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 MTAPQ13126 283 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 RPA4Q13156 261 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 VMACQ2NL98 169 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 DEFB110Q30KQ9 67 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 ZMAT1Q5H9K5 638 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 TAF8Q7Z7C8 310 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 CCDC116Q8IYX3 515 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms