RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZNF691Q5VV52 312 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 RBM45Q8IUH3 476 aaKnown RBP11.76□□□□□ -0.53
RNF4-201ENST00000314289 NLGN4XQ8N0W4 816 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 ACOT4Q8N9L9 421 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 NDNFQ8TB73 568 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 ZCCHC10Q8TBK6 192 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 TMEM19Q96HH6 336 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 SERHL2Q9H4I8 314 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 APOBEC3BQ9UH17 382 aaKnown RBP11.76□□□□□ -0.53
RNF4-201ENST00000314289 CYP8B1Q9UNU6 501 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 A0A1W2PR48 441 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 TRBC2A0A5B9 178 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 GSAPA4D1B5 854 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 PRR19A6NJB7 356 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 M0R3G1 203 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 PCDH17O14917 1159 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 DNAJB6O75190 326 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 JRKO75564 520 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 NADKO95544 446 aaPredicted RBP11.76□□□□□ -0.53
RNF4-201ENST00000314289 KRT75O95678 551 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 CHRM5P08912 532 aaPredicted RBP11.76□□□□□ -0.53
RNF4-201ENST00000314289 OR12D1P0DN82 309 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 PVRP15151 417 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 POLR2CP19387 275 aaPredicted RBP11.76□□□□□ -0.53
RNF4-201ENST00000314289 CCT3P49368 545 aaKnown RBP11.76□□□□□ -0.53
RNF4-201ENST00000314289 C1orf61Q13536 156 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 DGCR6Q14129 220 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 NFATC4Q14934 902 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 SYPL1Q16563 259 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 EXOC3L2Q2M3D2 409 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 IFI44LQ53G44 452 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 PRRT3Q5FWE3 981 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 CCDC81Q6ZN84 652 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 Q6ZSR6 202 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 CCDC71Q8IV32 467 aaPredicted RBP11.76□□□□□ -0.53
RNF4-201ENST00000314289 SLC5A8Q8N695 610 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 SCAIQ8N9R8 606 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 OR13H1Q8NG92 308 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 MTERF3Q96E29 417 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 WDR92Q96MX6 357 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 SRMSQ9H3Y6 488 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 GLIPR2Q9H4G4 154 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 EQTNQ9NQ60 294 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 ENPP5Q9UJA9 477 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 ZNF229Q9UJW7 825 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 LYVE1Q9Y5Y7 322 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 WDFY4Q6ZS81 3184 aa11.76□□□□□ -0.53
RNF4-201ENST00000314289 A0A0A6YYD5 115 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 C5orf58C9J3I9 102 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 SLC1A7O00341 560 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 PRICKLE3O43900 615 aaPredicted RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 TPST2O60704 377 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 PXNP49023 591 aaPredicted RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 TPTEP56180 551 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 PCBP4P57723 403 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 BTN3A2P78410 334 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 CDK5R2Q13319 367 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 C6orf183Q5T699 404 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 HDAC2Q92769 488 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 GTPBP3Q969Y2 492 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 NODALQ96S42 347 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 NIPSNAP1Q9BPW8 284 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 WDR12Q9GZL7 423 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 EPS8L2Q9H6S3 715 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 MVB12BQ9H7P6 319 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 DDX31Q9H8H2 851 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 CTPS2Q9NRF8 586 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 NDUFS2O75306 463 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 CLEC3AO75596 197 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ANGPTL1O95841 491 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ZNF24P17028 368 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 HNRNPA2B1P22626 353 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 RCVRNP35243 200 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 GP2P55259 537 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 VBP1P61758 197 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 OLR1P78380 273 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 FADDQ13158 208 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 SLC9A5Q14940 896 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ALG11Q2TAA5 492 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 UTS2BQ765I0 119 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ADCK1Q86TW2 530 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 FAM131CQ96AQ9 280 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 BBS4Q96RK4 519 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 QRSL1Q9H0R6 528 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 PRDM7Q9NQW5 492 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ZCCHC3Q9NUD5 404 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 TMEM74BQ9NUR3 256 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 COLEC10Q9Y6Z7 277 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 PRAMEF27A3QJZ7 478 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 ZNF860A6NHJ4 632 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 HMGN4O00479 90 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 EIF2S1P05198 315 aaKnown RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 ARAFP10398 606 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 DRD1P21728 446 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 HIST1H1TP22492 207 aaPredicted RBP11.75□□□□□ -0.53
RNF4-201ENST00000314289 TEAD1P28347 426 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 PCYT1AP49585 367 aa11.75□□□□□ -0.53
RNF4-201ENST00000314289 RPP38P78345 283 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms