RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 DUSP3P51452 185 aaPredicted RBP14.86□□□□□ -0.03
HCFC1-201ENST00000310441 SNTB2Q13425 540 aaKnown RBP14.86□□□□□ -0.03
HCFC1-201ENST00000310441 PPP2R2DQ66LE6 453 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 FAM83HQ6ZRV2 1179 aaPredicted RBP14.86□□□□□ -0.03
HCFC1-201ENST00000310441 CDK15Q96Q40 435 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 KCNH6Q9H252 994 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 FAM221BA6H8Z2 402 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF487B1APH4 448 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 FBXO48Q5FWF7 155 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 PGAM5Q96HS1 289 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 ARGFXA6NJG6 315 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 SNRNP200O75643 2136 aaKnown RBP14.86□□□□□ -0.03
HCFC1-201ENST00000310441 STC1P52823 247 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 HMGN3Q15651 99 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 CCDC58Q4VC31 144 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 OR8J1Q8NGP2 316 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 SPRYD4Q8WW59 207 aaPredicted RBP14.86□□□□□ -0.03
HCFC1-201ENST00000310441 TUBB1Q9H4B7 451 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 NOCTQ9UK39 431 aaKnown RBP14.86□□□□□ -0.03
HCFC1-201ENST00000310441 TEX264Q9Y6I9 313 aa14.86□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF318Q5VUA4 2279 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 XRCC1P18887 633 aaPredicted RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 CHATP28329 748 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 KREMEN2Q8NCW0 462 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 LRIG1Q96JA1 1093 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 HIPK2Q9H2X6 1198 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 PPM1HQ9ULR3 514 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 CNTN5O94779 1100 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 CSF1P09603 554 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 CELP19835 753 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 EDNRBP24530 442 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 DCST2Q5T1A1 773 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 OR4F3Q6IEY1 312 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 RAB7BQ96AH8 199 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 CNTNAP3BQ96NU0 1288 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF442Q9H7R0 627 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 AP1M2Q9Y6Q5 423 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 RGPD1P0DJD0 1748 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 BCL9LQ86UU0 1499 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 NUDT6P53370 316 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 ODF4Q2M2E3 257 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 DEFB115Q30KQ5 88 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF100Q8IYN0 542 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 IL17RCQ8NAC3 791 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 HSPBAP1Q96EW2 488 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 NELL2Q99435 816 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 CTPS2Q9NRF8 586 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 TRBV23OR9-2A0A075B6M9 112 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 RTCAO00442 366 aaKnown RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 THBS3P49746 956 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 RPS15AP62244 130 aaKnown RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 CERS5Q8N5B7 392 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 RHEBL1Q8TAI7 183 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 MYRFLQ96LU7 910 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 POU2F3Q9UKI9 436 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 HEATR1Q9H583 2144 aaKnown RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 TPT1P13693 172 aaKnown RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 BDKRB1P46663 353 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 RPS21P63220 83 aaKnown RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 MEF2DQ14814 521 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 UBXN2BQ14CS0 331 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 GPR157Q5UAW9 335 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 PYROXD2Q8N2H3 581 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 UPRTQ96BW1 309 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 ACOT7O00154 380 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 PIP5K1CO60331 668 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 TGM6O95932 706 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 SFXN5Q8TD22 340 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 TFGQ92734 400 aaPredicted RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 TSPAN10Q9H1Z9 355 aaPredicted RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 ABHD12BQ7Z5M8 362 aaPredicted RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 ARL14EPQ8N8R7 260 aaPredicted RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 ITPKCQ96DU7 683 aa14.85□□□□□ -0.03
HCFC1-201ENST00000310441 NDRG2Q9UN36 371 aaKnown RBP14.85□□□□□ -0.03
HCFC1-201ENST00000310441 TNFSF4P23510 183 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 TRAPPC6BQ86SZ2 158 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 PLD6Q8N2A8 252 aaKnown RBP14.84□□□□□ -0.03
HCFC1-201ENST00000310441 OR51G2Q8NGK0 314 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 TRUB1Q8WWH5 349 aaKnown RBP14.84□□□□□ -0.03
HCFC1-201ENST00000310441 RSC1A1Q92681 617 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 CPNE5Q9HCH3 593 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 SIX4Q9UIU6 781 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 H3BSA7 217 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 MPPED1O15442 326 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 SOX14O95416 240 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 PRPS1P60891 318 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 CHRNA1P02708 482 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 UNGP13051 313 aaPredicted RBP14.84□□□□□ -0.03
HCFC1-201ENST00000310441 PORP16435 677 aaPredicted RBP14.84□□□□□ -0.03
HCFC1-201ENST00000310441 HTR2BP41595 481 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 EEF1DP3Q658K8 133 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 KAZALD1Q96I82 304 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 GLTPQ9NZD2 209 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 ATG4BQ9Y4P1 393 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 OARD1Q9Y530 152 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 F8W036 122 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 HK3P52790 923 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 BLOC1S1P78537 153 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 C1orf94Q6P1W5 598 aa14.84□□□□□ -0.03
HCFC1-201ENST00000310441 HORMAD2Q8N7B1 307 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms