RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 B3GNTL1Q67FW5 361 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 FCRLBQ6BAA4 426 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 HSDL2Q6YN16 418 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 RNF111Q6ZNA4 994 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 LGI4Q8N135 537 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ARFGAP2Q8N6H7 521 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 APCDD1LQ8NCL9 501 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 NFAM1Q8NET5 270 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 OR1N1Q8NGS0 311 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 SUN3Q8TAQ9 357 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PTPMT1Q8WUK0 201 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PSMF1Q92530 271 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ZNF75CPQ92670 426 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 UCN3Q969E3 161 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PPWD1Q96BP3 646 aaKnown RBP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 FBXL20Q96IG2 436 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 FCRL1Q96LA6 429 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 TSSK3Q96PN8 268 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 BBS4Q96RK4 519 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 C1orf50Q9BV19 199 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 NUF2Q9BZD4 464 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 CDCP1Q9H5V8 836 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 MED4Q9NPJ6 270 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ZNF446Q9NWS9 450 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 HEY2Q9UBP5 337 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PPIEQ9UNP9 301 aaKnown RBP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ERVK-19Q9WJR5 959 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 EIF3LQ9Y262 564 aaKnown RBP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 DSPP15924 2871 aaKnown RBP10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 EXPH5Q8NEV8 1989 aa10.25□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 WASHC1A8K0Z3 465 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ATP8B1O43520 1251 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 LRATO95237 230 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 DDAH2O95865 285 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 OCRLQ01968 901 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 OC90Q02509 493 aaPredicted RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 RFTN2Q52LD8 501 aaPredicted RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ACER2Q5QJU3 275 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 C6orf136Q5SQH8 315 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 FAM71E1Q6IPT2 247 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 H3F3CQ6NXT2 135 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 IGFL2Q6UWQ7 119 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 IGFL3Q6UXB1 125 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 SLC29A4Q7RTT9 530 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PRICKLE2Q7Z3G6 844 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 R3HCC1LQ7Z5L2 792 aaKnown RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 RPS19BP1Q86WX3 136 aaKnown RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 TICAM1Q8IUC6 712 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 FAM9CQ8IZT9 166 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 BEST3Q8N1M1 668 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 VWA5B2Q8N398 1253 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 LIX1Q8N485 282 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 OR5L2Q8NGL0 311 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 CLHC1Q8NHS4 586 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PIWIL2Q8TC59 973 aaKnown RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ZNF721Q8TF20 911 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 THAP3Q8WTV1 239 aaPredicted RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 GFM2Q969S9 779 aaKnown RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 SENP5Q96HI0 755 aaPredicted RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 C3orf30Q96M34 536 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 UTP23Q9BRU9 249 aaKnown RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 MFRPQ9BY79 579 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 RNF32Q9H0A6 362 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 MEAF6Q9HAF1 191 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 SLAMF7Q9NQ25 335 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 SLC35C2Q9NQQ7 365 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PNPOQ9NVS9 261 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 STMN3Q9NZ72 180 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 NOP53Q9NZM5 478 aaKnown RBP10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 GIMAP2Q9UG22 337 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 CES1P1Q9UKY3 287 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 B3GNT3Q9Y2A9 372 aa10.24□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 A0A1W2PS29 197 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 OR5H15A6NDH6 313 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 OR6C76A6NM76 312 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 GABRR3A8MPY1 467 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 B8ZZF3 427 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 CDK2AP1O14519 115 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 HDAC3O15379 428 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PDPK1O15530 556 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 AKAP10O43572 662 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 WDPCPO95876 746 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ATP1B1P05026 303 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 JUNP05412 331 aaKnown RBP10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 BCKDHAP12694 445 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 LBPP18428 481 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 TACR1P25103 407 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 MPIP34949 423 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 NCBP2P52298 156 aaKnown RBP eCLIP10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 TLR1Q15399 786 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 SMU1Q2TAY7 513 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ZNF750Q32MQ0 723 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 NADK2Q4G0N4 442 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 IL23RQ5VWK5 629 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 HLA-DQA1Q5Y7H0 255 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 SLC6A19Q695T7 634 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 FAM180BQ6P0A1 224 aa10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 WDR75Q8IWA0 830 aaKnown RBP10.23□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 LRRC34Q8IZ02 419 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms