RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 TP53BP2Q13625 1128 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 OR4N5Q8IXE1 308 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 PQLC1Q8N2U9 271 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 OR56A1Q8NGH5 318 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 NETO1Q8TDF5 533 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 COL26A1Q96A83 441 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 CCDC74BQ96LY2 380 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 TMEM38AQ9H6F2 299 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 ZCCHC3Q9NUD5 404 aaKnown RBP16.49■□□□□ 0.23
KRT28-201ENST00000306658 FTSJ1Q9UET6 329 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 SCN2AQ99250 2005 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 FRYLO94915 3013 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 A0A1W2PS29 197 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 ZNF749O43361 778 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 EMC8O43402 210 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 LDB3O75112 727 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 FHP07954 510 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 NUDT7P0C024 238 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 BMP2P12643 396 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 ACP1P24666 158 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 ANXA11P50995 505 aaKnown RBP16.48■□□□□ 0.23
KRT28-201ENST00000306658 CASP9P55211 416 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 DSTNP60981 165 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 TMEM107Q6UX40 140 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 SZRD1Q7Z422 152 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 ZNF595Q8IYB9 648 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 RCBTB1Q8NDN9 531 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 TMEM52Q8NDY8 209 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 OR9A2Q8NGT5 310 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 SLCO4A1Q96BD0 722 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 TBC1D20Q96BZ9 403 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 ELP4Q96EB1 424 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 PEX11GQ96HA9 241 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 UGT2B28Q9BY64 529 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 DCAF13Q9NV06 445 aaKnown RBP16.48■□□□□ 0.23
KRT28-201ENST00000306658 THUMPD1Q9NXG2 353 aaKnown RBP16.48■□□□□ 0.23
KRT28-201ENST00000306658 NDOR1Q9UHB4 597 aa16.48■□□□□ 0.23
KRT28-201ENST00000306658 NTN3O00634 580 aaPredicted RBP16.47■□□□□ 0.23
KRT28-201ENST00000306658 HNRNPRO43390 633 aaKnown RBP16.47■□□□□ 0.23
KRT28-201ENST00000306658 FGF17O60258 216 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 BMP10O95393 424 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 PCGF2P35227 344 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 GCGRP47871 477 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 ZNF630Q2M218 657 aaPredicted RBP16.47■□□□□ 0.23
KRT28-201ENST00000306658 FAM98BQ52LJ0 330 aaKnown RBP16.47■□□□□ 0.23
KRT28-201ENST00000306658 TBCELQ5QJ74 424 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 CEACAM20Q6UY09 585 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 RNF111Q6ZNA4 994 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 LRRC74BQ6ZQY2 392 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 ADGRG5Q8IZF4 528 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 EID3Q8N140 333 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 SUMF1Q8NBK3 374 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 OR51Q1Q8NH59 317 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 MAGED4Q96JG8 741 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 TMEM121BQ9BXQ6 578 aaPredicted RBP16.47■□□□□ 0.23
KRT28-201ENST00000306658 SRPK3Q9UPE1 567 aa16.47■□□□□ 0.23
KRT28-201ENST00000306658 D6RAR5 112 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 CTNSO60931 367 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SLITRK5O94991 958 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 ATP1B1P05026 303 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 HOXB6P17509 224 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 KDELR2P33947 212 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 PRKAG1P54619 331 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 MAT1AQ00266 395 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 SLC13A2Q13183 592 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 TRA2AQ13595 282 aaKnown RBP eCLIP16.46■□□□□ 0.23
KRT28-201ENST00000306658 C16orf72Q14CZ0 275 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SF3A2Q15428 464 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 PHF19Q5T6S3 580 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 INTS11Q5TA45 600 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 TMEM126BQ8IUX1 230 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SLC30A8Q8IWU4 369 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 METTL27Q8N6F8 245 aaPredicted RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 MAL2Q969L2 176 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 ANKRD9Q96BM1 317 aaPredicted RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 SLC35G5Q96KT7 338 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 OLAHQ9NV23 265 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SAMD4AQ9UPU9 718 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 SEC16AO15027 2179 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 PLOD2O00469 737 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 CDX4O14627 284 aaPredicted RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 DSCR3O14972 297 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 B4GALT2O60909 372 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SERPINA1P01009 418 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SLC35E2P0CK97 266 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 VHLP40337 213 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 MC3RP41968 323 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 TXNL4AP83876 142 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 CDK6Q00534 326 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 ID2Q02363 134 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 CHRNB3Q05901 458 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SCARB2Q14108 478 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 TNFAIP8L2Q6P589 184 aaPredicted RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 SLITRK4Q8IW52 837 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 ZC3H7AQ8IWR0 971 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 HORMAD2Q8N7B1 307 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 PAPD5Q8NDF8 572 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 ADCY4Q8NFM4 1077 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 FBXO30Q8TB52 745 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 KAT2AQ92830 837 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms