RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ENTPD8Q5MY95 495 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ZBTB37Q5TC79 503 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 MEDAGQ5VYS4 303 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CTRB2Q6GPI1 263 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SDE2Q6IQ49 451 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 KIAA1324Q6UXG2 1013 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 CCDC81Q6ZN84 652 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GPAT4Q86UL3 456 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 FAM20CQ8IXL6 584 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 OXR1Q8N573 874 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SPERTQ8NA61 448 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 TMEM145Q8NBT3 493 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PROKR2Q8NFJ6 384 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 KBTBD8Q8NFY9 601 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 OR10G2Q8NGC3 310 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 OR52N2Q8NGI0 321 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 TMEM163Q8TC26 289 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 FOXJ1Q92949 421 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 MYDGFQ969H8 173 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SH3KBP1Q96B97 665 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 FAM120BQ96EK7 910 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 LCORQ96JN0 433 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 SLC22A12Q96S37 553 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ARHGAP9Q9BRR9 750 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 RNF121Q9H920 327 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ZNF556Q9HAH1 456 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 WASH6PQ9NQA3 447 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CUEDC1Q9NWM3 386 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 NTMQ9P121 344 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ZNF282Q9UDV7 671 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 RAPGEFL1Q9UHV5 662 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 EXOGQ9Y2C4 368 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 FCF1Q9Y324 198 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 KCNMB2Q9Y691 235 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 SIRT4Q9Y6E7 314 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 DNMT3AQ9Y6K1 912 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 CACNA1IQ9P0X4 2223 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CBX4O00257 560 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 BET1O15155 118 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GRM6O15303 877 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 IDH3BO43837 385 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 NOL3O60936 208 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 FHP07954 510 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 OR1D2P34982 312 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 MMP12P39900 470 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CRISP1P54107 249 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 TRA2BP62995 288 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 ZNF91Q05481 1191 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 INSL4Q14641 139 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GPR19Q15760 415 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 TMEM52BQ4KMG9 183 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ATP13A5Q4VNC0 1218 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PTRHD1Q6GMV3 140 aaKnown RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 ASTLQ6HA08 431 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 FAM92BQ6ZTR7 304 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 OTOP2Q7RTS6 562 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 FAM129CQ86XR2 697 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PLCZ1Q86YW0 608 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 FAM109AQ8N4B1 249 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 OR2A12Q8NGT7 310 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 COX14Q96I36 57 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 NECTIN4Q96NY8 510 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 COPS8Q99627 209 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PIP5K1AQ99755 562 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 CHCHD6Q9BRQ6 235 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 HDHD5Q9BXW7 423 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PLA2G12AQ9BZM1 189 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 GIMAP4Q9NUV9 329 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 TAAR2Q9P1P5 351 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 KCNN3Q9UGI6 736 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 ATP11BQ9Y2G3 1177 aa5.16□□□□□ -1.58
VPS50-202ENST00000305866 PCYT1BQ9Y5K3 369 aaPredicted RBP5.16□□□□□ -1.58
VPS50-202ENST00000305866 OR6C65A6NJZ3 312 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 SMLR1H3BR10 107 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 TBXA2RP21731 343 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 CD70P32970 193 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 S100A3P33764 101 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 TIE1P35590 1138 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 OR1E2P47887 323 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 MECP2P51608 486 aaKnown RBP5.15□□□□□ -1.58
VPS50-202ENST00000305866 RPS25P62851 125 aaKnown RBP5.15□□□□□ -1.58
VPS50-202ENST00000305866 C2orf80Q0P641 193 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 ARHGAP19Q14CB8 494 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 PLK5Q496M5 336 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 ZNF805Q5CZA5 627 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 SERPINA13PQ6UXR4 307 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 ESX1Q8N693 406 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 GDPD1Q8N9F7 314 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 RASSF5Q8WWW0 418 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 UCN3Q969E3 161 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 TSSK3Q96PN8 268 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 FAM129BQ96TA1 746 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 EBPLQ9BY08 206 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 GPR63Q9BZJ6 419 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 TMEM245Q9H330 911 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 DPEP2Q9H4A9 486 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 SCN3BQ9NY72 215 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 STOX2Q9P2F5 926 aaPredicted RBP5.15□□□□□ -1.58
VPS50-202ENST00000305866 VPS29Q9UBQ0 182 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms