RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 RFKQ969G6 155 aa12.43□□□□□ -0.42
TRIM35-201ENST00000305364 PIGUQ9H490 435 aa12.43□□□□□ -0.42
TRIM35-201ENST00000305364 BTNL2Q9UIR0 455 aa12.43□□□□□ -0.42
TRIM35-201ENST00000305364 SLC38A8A6NNN8 435 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 SRPRAP08240 638 aaKnown RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 MAZP56270 477 aaKnown RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 PIN1Q13526 163 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 ZNF791Q3KP31 576 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 ARL9Q6T311 187 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 ZNF852Q6ZMS4 543 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 FAM124AQ86V42 546 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 TMEM145Q8NBT3 493 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 BBS4Q96RK4 519 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 P2RY13Q9BPV8 354 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 RWDD3Q9Y3V2 267 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 TMEM88BA6NKF7 163 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 KDM4BO94953 1096 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 AOAHP28039 575 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 LCN1P31025 176 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 CCR7P32248 378 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 SLC5A12Q1EHB4 618 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 Q5BKY6 102 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 ZNF551Q7Z340 670 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 OR2T35Q8NGX2 323 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 SDHCQ99643 169 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 C17orf62Q9BQA9 187 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 SLC12A9Q9BXP2 914 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 CACNG6Q9BXT2 260 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 RBCK1Q9BYM8 510 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 ACER3Q9NUN7 267 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 KLHL28Q9NXS3 571 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 FAAHO00519 579 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 SLC43A1O75387 559 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 ERAL1O75616 437 aaKnown RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 CLTBP09497 229 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 SRCP12931 536 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 CD9P21926 228 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 ACVR2AP27037 513 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 BDKRB1P46663 353 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 TRAPPC5Q8IUR0 188 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 GABRQQ9UN88 632 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 ATP6V1G2-DDX39BF2Z307 99 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 PRG2P13727 222 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 DRD5P21918 477 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 MTNR1AP48039 350 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 AP2S1P53680 142 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 P2RY14Q15391 338 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-201ENST00000305364 FTMTQ8N4E7 242 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 SCRN2Q96FV2 425 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 EVA1BQ9NVM1 165 aa12.42□□□□□ -0.42
TRIM35-201ENST00000305364 CIB4A0PJX0 185 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 GZMMP51124 257 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 C19orf57Q0VDD7 668 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 KCNA10Q16322 511 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 CCL14Q16627 93 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 ARHGAP15Q53QZ3 475 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 MACC1Q6ZN28 852 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 LSMEM1Q8N8F7 131 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 TM9SF4Q92544 642 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 YIPF4Q9BSR8 244 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 PCDHGB7Q9Y5F8 929 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 SLC19A2O60779 497 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 ALPPP05187 535 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 ATP1B2P14415 290 aaPredicted RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 RPL17P18621 184 aaKnown RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 PTNP21246 168 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 PREPP48147 710 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 ANXA11P50995 505 aaKnown RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 ZNF697Q5TEC3 545 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 TIGD3Q6B0B8 471 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 SMARCD3Q6STE5 483 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 ARSKQ6UWY0 536 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 SLC36A4Q6YBV0 504 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 OTOP2Q7RTS6 562 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 KLBQ86Z14 1044 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 CDV3Q9UKY7 258 aaKnown RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 OR1D2P34982 312 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 EPHB3P54753 998 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 WDR5P61964 334 aaKnown RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 MLIPQ5VWP3 458 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 METTL2BQ6P1Q9 378 aaKnown RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 NANOGP1Q8N7R0 232 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 ZNF680Q8NEM1 530 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 COQ10AQ96MF6 247 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 OR4K3Q96R72 315 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 DCLRE1CQ96SD1 692 aaKnown RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 THAP7Q9BT49 309 aaPredicted RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 SPATA5L1Q9BVQ7 753 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 OR51J1Q9H342 316 aa12.41□□□□□ -0.42
TRIM35-201ENST00000305364 EXOSC1Q9Y3B2 195 aaKnown RBP12.41□□□□□ -0.42
TRIM35-201ENST00000305364 L7N2F9 121 aa12.4□□□□□ -0.42
TRIM35-201ENST00000305364 STK25O00506 426 aa12.4□□□□□ -0.42
TRIM35-201ENST00000305364 NUP62P37198 522 aaPredicted RBP12.4□□□□□ -0.42
TRIM35-201ENST00000305364 VSX2P58304 361 aaPredicted RBP12.4□□□□□ -0.42
TRIM35-201ENST00000305364 IL20RBQ6UXL0 311 aa12.4□□□□□ -0.42
TRIM35-201ENST00000305364 TMC8Q8IU68 726 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms