RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 STATHP02808 62 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 CCKBRP32239 447 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 SF3A2Q15428 464 aaKnown RBP12.29□□□□□ -0.44
COL3A1-201ENST00000304636 LRRC69Q6ZNQ3 347 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 B3GNT8Q7Z7M8 397 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 OR6C4Q8NGE1 309 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 HUS1BQ8NHY5 278 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL3A1-201ENST00000304636 ADAMTS19Q8TE59 1207 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 HERVK_113Q902F9 699 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 TTTY10Q9BZA0 68 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 GPRC5BQ9NZH0 403 aa12.29□□□□□ -0.44
COL3A1-201ENST00000304636 MEIOCA2RUB1 952 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 GLOD5A6NK44 160 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 EMC8O43402 210 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 FHP07954 510 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 CHMP24386 653 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 TAZQ16635 292 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ODF4Q2M2E3 257 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 GALNT7Q86SF2 657 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 NRROSQ86YC3 692 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 DTX3Q8N9I9 347 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 KLK6Q92876 244 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 PMEPA1Q969W9 287 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 NMNAT1Q9HAN9 279 aaPredicted RBP12.28□□□□□ -0.44
COL3A1-201ENST00000304636 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 COCHO43405 550 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 FCER2P06734 321 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 RPL10P27635 214 aaKnown RBP12.28□□□□□ -0.44
COL3A1-201ENST00000304636 MASP1P48740 699 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 UGT3A2Q3SY77 523 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 PLEKHN1Q494U1 663 aaPredicted RBP12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ALG1LQ6GMV1 187 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 CCDC116Q8IYX3 515 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 LILRA2Q8N149 483 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 PARP16Q8N5Y8 322 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 OR56A3Q8NH54 315 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 KCNN1Q92952 543 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 MAL2Q969L2 176 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF285Q96NJ3 590 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 NAA50Q9GZZ1 169 aaKnown RBP12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF700Q9H0M5 742 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF304Q9HCX3 659 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 HEBP1Q9NRV9 189 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 TREX1Q9NSU2 369 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ANHXE9PGG2 379 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 RAB3BP20337 219 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 PCGF2P35227 344 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 FGFBP1Q14512 234 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 CCL14Q16627 93 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 Q6ZNX1 250 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF550Q7Z398 422 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 TEX26Q8N6G2 289 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 LILRB4Q8NHJ6 448 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 C3orf30Q96M34 536 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 NANSQ9NR45 359 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 LOC285095A0A1B0GVY8 99 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 H7BY64 318 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF208O43345 1280 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 LDB2O43679 373 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 NARSO43776 548 aaKnown RBP12.28□□□□□ -0.44
COL3A1-201ENST00000304636 ACVR1BP36896 505 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 SOX2P48431 317 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 IRF5Q13568 498 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 TBCEQ15813 527 aaPredicted RBP12.28□□□□□ -0.44
COL3A1-201ENST00000304636 KDELC1Q6UW63 502 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 SYT14Q8NB59 555 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 CD200R1Q8TD46 325 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 SETD7Q8WTS6 366 aaKnown RBP12.28□□□□□ -0.44
COL3A1-201ENST00000304636 THAP4Q8WY91 577 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 APIPQ96GX9 242 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 PRAP1Q96NZ9 151 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 BTNL2Q9UIR0 455 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 FBXL3Q9UKT7 428 aa12.28□□□□□ -0.44
COL3A1-201ENST00000304636 COL14A1Q05707 1796 aaKnown RBP12.28□□□□□ -0.44
COL3A1-201ENST00000304636 TEX13DA0A0J9YY54 714 aaPredicted RBP12.27□□□□□ -0.44
COL3A1-201ENST00000304636 ALPLP05186 524 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 PFKMP08237 780 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 TBPL1P62380 186 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 DECR1Q16698 335 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 COL28A1Q2UY09 1125 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 LRRC37A5PQ49AS3 106 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 CNIH2Q6PI25 160 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 NUP43Q8NFH3 380 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 OR4K14Q8NGD5 310 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 DPF3Q92784 378 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 GLYATL1Q969I3 302 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 DEFB118Q96PH6 123 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 GON7Q9BXV9 100 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.27□□□□□ -0.44
COL3A1-201ENST00000304636 OLAHQ9NV23 265 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 CNOT2Q9NZN8 540 aaKnown RBP12.27□□□□□ -0.44
COL3A1-201ENST00000304636 RGPD8O14715 1765 aaPredicted RBP12.27□□□□□ -0.44
COL3A1-201ENST00000304636 TRBV2A0A0J9YWF9 115 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 ADH5P11766 374 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 PITPNBP48739 271 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 POU6F2P78424 691 aaPredicted RBP12.27□□□□□ -0.44
COL3A1-201ENST00000304636 FAM214AQ32MH5 1076 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 CDKL4Q5MAI5 379 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 GPR149Q86SP6 731 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms