RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 LHX5Q9H2C1 402 aa13.67□□□□□ -0.22
HIPK3-201ENST00000303296 C14orf119Q9NWQ9 140 aa13.67□□□□□ -0.22
HIPK3-201ENST00000303296 CBX7O95931 251 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 GABRR1P24046 479 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 DNASE1P24855 282 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 SQSTM1Q13501 440 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 ZBED5Q49AG3 693 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 MRPL21Q7Z2W9 205 aaKnown RBP13.66□□□□□ -0.22
HIPK3-201ENST00000303296 DIO2Q92813 273 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 FBXW5Q969U6 566 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-201ENST00000303296 CNTN6Q9UQ52 1028 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 VSTM2BA6NLU5 285 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 F5H5K5 113 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 PTPRCAPQ14761 206 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 MEP1AQ16819 746 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 EARS2Q5JPH6 523 aaKnown RBP13.66□□□□□ -0.22
HIPK3-201ENST00000303296 HIST2H3PS2Q5TEC6 136 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 Q8N402 240 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 SLC32A1Q9H598 525 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 EVI2BP34910 448 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 PCBP1Q15365 356 aaKnown RBP eCLIP13.66□□□□□ -0.222e-7■■■■■ 44.3
HIPK3-201ENST00000303296 RBMXL3Q8N7X1 1067 aaKnown RBP13.66□□□□□ -0.22
HIPK3-201ENST00000303296 NTAN1Q96AB6 310 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 SYNPO2LQ9H987 977 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 CPS1P31327 1500 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-201ENST00000303296 MEIS3P1A6NDR6 274 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 LRRTM2O43300 516 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 RAD1O60671 282 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 PAK4O96013 591 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-201ENST00000303296 AMY2AP04746 511 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 PTGER4P35408 488 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 PAQR3Q6TCH7 311 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 TMEM205Q6UW68 189 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 KLHDC7BQ96G42 594 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 ZDHHC3Q9NYG2 299 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 SC5DO75845 299 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 DEFA4P12838 97 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 ABOP16442 354 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 NDST2P52849 883 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 ARG2P78540 354 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 WDR45BQ5MNZ6 344 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 KIAA1614Q5VZ46 1190 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 FRG2Q64ET8 278 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 TMEM198Q66K66 360 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 RNF111Q6ZNA4 994 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 CATSPERGQ6ZRH7 1159 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 COMMD7Q86VX2 200 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 NPAS4Q8IUM7 802 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 FAM46BQ96A09 425 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 FRG2BQ96QU4 278 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 MCHR1Q99705 422 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 BCO2Q9BYV7 579 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 EBF2Q9HAK2 575 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 SLC17A6Q9P2U8 582 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 RNF6Q9Y252 685 aa13.66□□□□□ -0.22
HIPK3-201ENST00000303296 INMT-MINDY4F8WBC2 141 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 TPSB2P20231 275 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 CHATP28329 748 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 TPSAB1Q15661 275 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 RAB30Q15771 203 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 OR4N5Q8IXE1 308 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 HORMAD2Q8N7B1 307 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 LRRC52Q8N7C0 313 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SLC16A10Q8TF71 515 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 ECHDC3Q96DC8 303 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 ALOX15BO15296 676 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SIX3O95343 332 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 HLA-EP13747 358 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 HERVK_113P63132 956 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 FBXO43Q4G163 708 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 GPRC6AQ5T6X5 926 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 C22orf42Q6IC83 251 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 C3P1Q6ZMU1 363 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 PLEKHG7Q6ZR37 379 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 USP53Q70EK8 1073 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SERPINA12Q8IW75 414 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 RDH10Q8IZV5 341 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SUMF2Q8NBJ7 301 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 FAM83FQ8NEG4 500 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 PPIL3Q9H2H8 161 aaKnown RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SRRDQ9UH36 339 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 TRAF3IP2O43734 574 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 NUDT21O43809 227 aaKnown RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 CILPO75339 1184 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 RGS9O75916 674 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 RPL7P18124 248 aaKnown RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 ART1P52961 327 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 IL20RBQ6UXL0 311 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 PIM3Q86V86 326 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 PPTC7Q8NI37 304 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 TFGQ92734 400 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 ZNF419Q96HQ0 510 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SCLYQ96I15 445 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 TMEM74Q96NL1 305 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 NEO1Q92859 1461 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 TCRBV21S2A2A0A5A6 115 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SLITRK5O94991 958 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms