RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 CATSPER2Q96P56 530 aa18.72■□□□□ 0.59
SCAMP3-201ENST00000302631 DGAT2Q96PD7 388 aa18.72■□□□□ 0.59
SCAMP3-201ENST00000302631 LPAR4Q99677 370 aa18.72■□□□□ 0.59
SCAMP3-201ENST00000302631 ELAC2Q9BQ52 826 aaKnown RBP18.72■□□□□ 0.59
SCAMP3-201ENST00000302631 FBXL4Q9UKA2 621 aa18.72■□□□□ 0.59
SCAMP3-201ENST00000302631 TRIM33Q9UPN9 1127 aa18.72■□□□□ 0.59
SCAMP3-201ENST00000302631 PRKAR1AP10644 381 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 LAMP1P11279 417 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 NUP214P35658 2090 aaPredicted RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 FEN1P39748 380 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 SOX8P57073 446 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 SRSF11Q05519 484 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 MGAT2Q10469 447 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 MLC1Q15049 377 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 DPY19L1Q2PZI1 675 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 DCAF10Q5QP82 559 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 ANKRD26P1Q6NSI1 321 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 FAM180BQ6P0A1 224 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 CPLX4Q7Z7G2 160 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 CPSF7Q8N684 471 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 TMEM102Q8N9M5 508 aaPredicted RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 OR14A16Q8NHC5 309 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 ZNF675Q8TD23 568 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 PPWD1Q96BP3 646 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 CTHRC1Q96CG8 243 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 FER1L6-AS2Q96M78 137 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 PRPF18Q99633 342 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 BHLHE41Q9C0J9 482 aaPredicted RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 CXorf21Q9HAI6 301 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 SLAMF7Q9NQ25 335 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 PNO1Q9NRX1 252 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 ACSS1Q9NUB1 689 aaPredicted RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 GIMAP4Q9NUV9 329 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 SH3BP4Q9P0V3 963 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 ENTPD4Q9Y227 616 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 COPG1Q9Y678 874 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 LAMA5O15230 3695 aa18.71■□□□□ 0.59
SCAMP3-201ENST00000302631 MAP1BP46821 2468 aaKnown RBP18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 NSG1A0A0A6YYJ2 146 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 SCN2BO60939 215 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 IFNA16P05015 189 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 IFI6P09912 130 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 COX7A2P14406 83 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 MPIP34949 423 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 WNT3P56703 355 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 SLC26A5P58743 744 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 MAP4K2Q12851 820 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 RPS6KA2Q15349 733 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 PRICKLE4Q2TBC4 344 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 CPTPQ5TA50 214 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 PLAG1Q6DJT9 500 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 APLFQ8IW19 511 aaPredicted RBP18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 CCDC116Q8IYX3 515 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 MIER2Q8N344 545 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 MORN4Q8NDC4 146 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 M1APQ8TC57 530 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 DAZLQ92904 295 aaKnown RBP18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 GLIPR2Q9H4G4 154 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 ATAD3AQ9NVI7 634 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 ZNF639Q9UID6 485 aa18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 G3BP2Q9UN86 482 aaKnown RBP18.7■□□□□ 0.58
SCAMP3-201ENST00000302631 A8MUA0 341 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 C17orf105B2RV13 164 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 PDPK1O15530 556 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 SLC22A3O75751 556 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 SEC24DO94855 1032 aaPredicted RBP18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 DDAH2O95865 285 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 S1PR1P21453 382 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 PHC1P78364 1004 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 Q0VFX4 171 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 SQLEQ14534 574 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 EXT1Q16394 746 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 APCDD1LQ8NCL9 501 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 RIT1Q92963 219 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 CIDECQ96AQ7 238 aaPredicted RBP18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 AMDHD1Q96NU7 426 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 DUSP26Q9BV47 211 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 SEMA4CQ9C0C4 833 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 PRORYQ9H606 182 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 MAN2B2Q9Y2E5 1009 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 CLCA3PQ9Y6N3 262 aa18.69■□□□□ 0.58
SCAMP3-201ENST00000302631 OR10H2O60403 315 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 SLITRK5O94991 958 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 IGKV3-11P04433 115 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 ICAM2P13598 275 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 RRADP55042 308 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 NME5P56597 212 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 FUT7Q11130 342 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 SF3A3Q12874 501 aaKnown RBP eCLIP18.68■□□□□ 0.589e-8■■■■■ 28.3
SCAMP3-201ENST00000302631 ZNF628Q5EBL2 1059 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 PAOXQ6QHF9 649 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 FUNDC1Q8IVP5 155 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 AMER2Q8N7J2 671 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 B3GNT7Q8NFL0 401 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 ELP5Q8TE02 316 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 ZNF721Q8TF20 911 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 FBXL20Q96IG2 436 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 BBS4Q96RK4 519 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 CCT8L2Q96SF2 557 aa18.68■□□□□ 0.58
SCAMP3-201ENST00000302631 ZNF160Q9HCG1 818 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms