RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 HMGB3O15347 200 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MAFKO60675 156 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ETFAP13804 333 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OTX2P32243 289 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TUBA1BP68363 451 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TUBA4AP68366 448 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TUBA3EQ6PEY2 450 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RNF111Q6ZNA4 994 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TUBA1AQ71U36 451 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF709Q8N972 641 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 BADQ92934 168 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MSANTD3Q96H12 275 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EIF5A2Q9GZV4 153 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CIB4A0PJX0 185 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 A6NCN8 305 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 HEPACAM2A8MVW5 462 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PMM2O15305 246 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SIM1P81133 766 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RPL19P84098 196 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 WDR45BQ5MNZ6 344 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 HUS1BQ8NHY5 278 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ELP5Q8TE02 316 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TCEAL3Q969E4 200 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 A0A096LPI6 279 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 M0R233 179 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KIAA0513O60268 411 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 BRINP1O60477 761 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLC19A2O60779 497 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MITFO75030 526 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 AMY2BP19961 511 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TIA1P31483 386 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RBMXP38159 391 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LEPRP48357 1165 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KCNC1P48547 511 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SHC2P98077 582 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 APOFQ13790 326 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RAB30Q15771 203 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR4C11Q6IEV9 310 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR56A3Q8NH54 315 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TRMT10AQ8TBZ6 339 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PROKR1Q8TCW9 393 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NPRL2Q8WTW4 380 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PEX13Q92968 403 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RADILQ96JH8 1075 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF382Q96SR6 550 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 POT1Q9NUX5 634 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CCDC163A0A0D9SF12 145 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF35P13682 527 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FECHP22830 423 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TAS2R43P59537 309 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SFRP4Q6FHJ7 346 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NIPAL1Q6NVV3 410 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CSNK1A1LQ8N752 337 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR5P2Q8WZ92 322 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 INPP5KQ9BT40 448 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLC2A4RGQ9NR83 387 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PAK1IP1Q9NWT1 392 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GLS2Q9UI32 602 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KLF11O14901 512 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 S1PR4O95977 384 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PLP2Q04941 152 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 INCA1Q0VD86 236 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLC27A4Q6P1M0 643 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LEG1Q6P5S2 330 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ASRGL1Q7L266 308 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF367Q7RTV3 350 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TMEM151BQ8IW70 566 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 Q8N402 240 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR51L1Q8NGJ5 315 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SCGB1C1Q8TD33 95 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CPNE2Q96FN4 548 aaPredicted RBP12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LMF1Q96S06 567 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 YTHDF1Q9BYJ9 559 aaKnown RBP12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MGAT4CQ9UBM8 478 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EEF1E1-BLOC1S5C9J1V9 151 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 INMT-MINDY4F8WBC2 141 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RASAL1O95294 804 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GCGRP47871 477 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ARSDP51689 593 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SQSTM1Q13501 440 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DOC2AQ14183 400 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RHEBQ15382 184 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TRAM1L1Q8N609 369 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR4K13Q8NH42 304 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TAS2R3Q9NYW6 316 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLCO3A1Q9UIG8 710 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FARS2O95363 451 aaKnown RBP12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 F2P00734 622 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PYCR1P32322 319 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 HAGHLQ6PII5 290 aaPredicted RBP12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF550Q7Z398 422 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 C6orf120Q7Z4R8 191 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GID4Q8IVV7 300 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LRRC25Q8N386 305 aaPredicted RBP12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CREB3L4Q8TEY5 395 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms