RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MMP28Q9H239 520 aa10.56□□□□□ -0.72
PBRM1-201ENST00000296302 KLHL9Q9P2J3 617 aa10.56□□□□□ -0.72
PBRM1-201ENST00000296302 LOC285095A0A1B0GVY8 99 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 FMO6PO60774 539 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 JRKO75564 520 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ITGA5P08648 1049 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 S1PR1P21453 382 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 GGT2P36268 569 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 HTR6P50406 440 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 FAM214AQ32MH5 1076 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 METTL11BQ5VVY1 283 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 CNIH2Q6PI25 160 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 SUSD1Q6UWL2 747 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 TMPRSS12Q86WS5 348 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 HERVK_113Q902F9 699 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 TRBV2A0A0J9YWF9 115 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 PPM1BO75688 479 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 FHP07954 510 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 HCKP08631 526 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ZBTB48P10074 688 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 PITPNBP48739 271 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ART1P52961 327 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 DOC2AQ14183 400 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ODF4Q2M2E3 257 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 UGT3A2Q3SY77 523 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 NLGN2Q8NFZ4 835 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.55□□□□□ -0.721e-7■■■■■ 43.8
PBRM1-201ENST00000296302 CNOT9Q92600 299 aaKnown RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 OTUB2Q96DC9 234 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 TMEM175Q9BSA9 504 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 Q9Y3F1 56 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 KCPQ6ZWJ8 1503 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 MYH2Q9UKX2 1941 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 NAP1L6A6NFF2 107 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 EIF3FO00303 357 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 EMC8O43402 210 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 CDK1P06493 297 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 PRKACAP17612 351 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ADH7P40394 386 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 GRSF1Q12849 480 aaKnown RBP eCLIP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 TMEM115Q12893 351 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 CHAF1BQ13112 559 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 SPCS2Q15005 226 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 TBCEQ15813 527 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 CHRDL2Q6WN34 429 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 Q6ZNX1 250 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 NRROSQ86YC3 692 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 NPWQ8N729 165 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 OR6N2Q8NGY6 317 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 MFSD8Q8NHS3 518 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ARNTL2Q8WYA1 636 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 SNAPC3Q92966 411 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 C17orf62Q9BQA9 187 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 OR10A4Q9H209 315 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 NT5DC2Q9H857 520 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 CARS2Q9HA77 564 aaKnown RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 KCNIP3Q9Y2W7 256 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 B4GAT1O43505 415 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ACVR1BP36896 505 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 POU6F2P78424 691 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ZNF691Q5VV52 312 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 SFRP4Q6FHJ7 346 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 GRHL2Q6ISB3 625 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 WDR53Q7Z5U6 358 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ZFP41Q8N8Y5 198 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 ZNF565Q8N9K5 539 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 DBF4BQ8NFT6 615 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 OR4K5Q8NGD3 323 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 POLDIP3Q9BY77 421 aaKnown RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 OR51E2Q9H255 320 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 PCDHB16Q9NRJ7 776 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 CNOT2Q9NZN8 540 aaKnown RBP10.55□□□□□ -0.72
PBRM1-201ENST00000296302 MYH6P13533 1939 aa10.55□□□□□ -0.72
PBRM1-201ENST00000296302 HSPA12AO43301 675 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 OAZ2O95190 189 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 AHSA1O95433 338 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 ETFAP13804 333 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 ZNF8P17098 575 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-201ENST00000296302 SLC6A9P48067 706 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 SELENOWP63302 87 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 JAG1P78504 1218 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 AGAP7PQ5VUJ5 663 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 METTL2BQ6P1Q9 378 aaKnown RBP10.54□□□□□ -0.72
PBRM1-201ENST00000296302 ARHGAP11AQ6P4F7 1023 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 TMEM205Q6UW68 189 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 ZSCAN1Q8NBB4 408 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 TTTY10Q9BZA0 68 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 AQP9O43315 295 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 AP1G1O43747 822 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 SC5DO75845 299 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 CD68P34810 354 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-201ENST00000296302 HNF1BP35680 557 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 ZNF648Q5T619 568 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-201ENST00000296302 CPZQ66K79 652 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 FAM217AQ8IXS0 508 aa10.54□□□□□ -0.72
PBRM1-201ENST00000296302 DTX3Q8N9I9 347 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms