RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 TAC3Q9UHF0 121 aa12.97□□□□□ -0.33
NCSTN-201ENST00000294785 IQCMA0A1B0GVH7 501 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 MYL12BO14950 172 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 ADH1CP00326 375 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 MYCP01106 439 aaPredicted RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 PPP2R1BP30154 601 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 CRYBB2P43320 205 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 CCT3P49368 545 aaKnown RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 RUNX1T1Q06455 604 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 HNRNPA1L2Q32P51 320 aaKnown RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 AMZ2Q86W34 360 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 CLIP4Q8N3C7 705 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 IL17RDQ8NFM7 739 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 SLC7A13Q8TCU3 470 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 COX14Q96I36 57 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 SPATA5L1Q9BVQ7 753 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 TSSK6Q9BXA6 273 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 TMEM165Q9HC07 324 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 EXOSC4Q9NPD3 245 aaKnown RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 SSR3Q9UNL2 185 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 DIMT1Q9UNQ2 313 aaKnown RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 CAB39Q9Y376 341 aaPredicted RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 SOX14O95416 240 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 RPS19P39019 145 aaKnown RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 METAP1P53582 386 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 TARDBPQ13148 414 aaKnown RBP eCLIP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 ELAVL3Q14576 367 aaKnown RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 CCDC92Q53HC0 331 aaPredicted RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 C9orf64Q5T6V5 341 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 TBC1D19Q8N5T2 526 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 MRPL43Q8N983 215 aaKnown RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 RAB8BQ92930 207 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 ERLEC1Q96DZ1 483 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 TREX2Q9BQ50 279 aaPredicted RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 ACAT2Q9BWD1 397 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 POLR2J2Q9GZM3 115 aaKnown RBP12.96□□□□□ -0.33
NCSTN-201ENST00000294785 FBXL12Q9NXK8 326 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 PLAGL1Q9UM63 463 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 A4GNTQ9UNA3 340 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 SNX11Q9Y5W9 270 aa12.96□□□□□ -0.33
NCSTN-201ENST00000294785 HIDE1A8MVS5 230 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 RTCAO00442 366 aaKnown RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 SLC28A2O43868 658 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 TPST2O60704 377 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 NME6O75414 186 aaPredicted RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 GSTT2P0CG29 244 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 GSTT2BP0CG30 244 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 CCL5P13501 91 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 CSF2RAP15509 400 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 SOX3P41225 446 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 ERVFC1P60507 584 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 DOC2BQ14184 412 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 ZNF544Q6NX49 715 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 FAM180BQ6P0A1 224 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 ADAMTSL4Q6UY14 1074 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 SLC35G5Q96KT7 338 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 ZSWIM3Q96MP5 696 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 SLC6A18Q96N87 628 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 RSPO3Q9BXY4 272 aaPredicted RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 HCN2Q9UL51 889 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 SLC9A8Q9Y2E8 581 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 PCDHGB2Q9Y5G2 931 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 DNMT3AQ9Y6K1 912 aaPredicted RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 IRGMA1A4Y4 181 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 NDUFS4O43181 175 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 B4GALT2O60909 372 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 TP53P04637 393 aaPredicted RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 DRD2P14416 443 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 TP53BP2Q13625 1128 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 NDUFA5Q16718 116 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 CELF5Q8N6W0 485 aaKnown RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 TCEANCQ8N8B7 351 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 OR4D11Q8NGI4 311 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 VANGL1Q8TAA9 524 aaPredicted RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 BBS10Q8TAM1 723 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 EXOSC8Q96B26 276 aaKnown RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 ABCG4Q9H172 646 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 DDX31Q9H8H2 851 aaKnown RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 LHX9Q9NQ69 397 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 CLEC2DQ9UHP7 191 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 KLHL20Q9Y2M5 609 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 HCFC2Q9Y5Z7 792 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 TCF20Q9UGU0 1960 aaKnown RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 NINQ8N4C6 2090 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 HEPACAM2A8MVW5 462 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 RAB36O95755 333 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 LGI1O95970 557 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 IL1AP01583 271 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 HBQ1P09105 142 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 ACADMP11310 421 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 CKMT1AP12532 417 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 PSPHP78330 225 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 HTRA4P83105 476 aaPredicted RBP12.95□□□□□ -0.34
NCSTN-201ENST00000294785 GNA13Q14344 377 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 LRRC26Q2I0M4 334 aa12.95□□□□□ -0.34
NCSTN-201ENST00000294785 FNDC3BQ53EP0 1204 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms