RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 FAM72BQ86X60 149 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 NUP43Q8NFH3 380 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 C9J4A7 227 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 RBBP9O75884 186 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 APOFQ13790 326 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 GLT8D1Q68CQ7 371 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 SLC15A4Q8N697 577 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 BBS1Q8NFJ9 593 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 C2orf15Q8WU43 125 aaKnown RBP15.45■□□□□ 0.06
SSRP1-202ENST00000293880 SYNPO2LQ9H987 977 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 FAIMQ9NVQ4 179 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 TRBV2A0A0J9YWF9 115 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 NPIPA2E9PIF3 369 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 NPIPA3F8WFD2 350 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 HCRTR2O43614 444 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 DUSP11O75319 330 aaKnown RBP15.45■□□□□ 0.06
SSRP1-202ENST00000293880 SSTR4P31391 388 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 IER5LQ5T953 404 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 C12orf40Q86WS4 652 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 PDZD9Q8IXQ8 264 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 OR2AP1Q8NGE2 309 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 MAL2Q969L2 176 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 FAM118AQ9NWS6 357 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 STUB1Q9UNE7 303 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 EOMESO95936 686 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 CD9P21926 228 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 FGFBP1Q14512 234 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 HS3ST5Q8IZT8 346 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 FANCFQ9NPI8 374 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 A0A1B0GVG6 124 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 KLHL33A6NCF5 533 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 IFNA17P01571 189 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 PET100P0DJ07 73 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 TMBIM6P55061 237 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF763Q0D2J5 394 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 CLDND1Q9NY35 253 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 CASC3O15234 703 aaKnown RBP15.44■□□□□ 0.06
SSRP1-202ENST00000293880 SLC34A2O95436 690 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 IFNA5P01569 189 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 CAMLGP49069 296 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ECH1Q13011 328 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ZSWIM9Q86XI8 627 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 NLGN4YQ8NFZ3 816 aaPredicted RBP15.44■□□□□ 0.06
SSRP1-202ENST00000293880 C15orf40Q8WUR7 153 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 BORCS7-ASMTA0A0B4J1R7 106 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 TSTD3H0UI37 97 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 GNSP15586 552 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 AQP2P41181 271 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 GRASPQ7Z6J2 395 aaPredicted RBP15.44■□□□□ 0.06
SSRP1-202ENST00000293880 OR4N5Q8IXE1 308 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
SSRP1-202ENST00000293880 KIAA1191Q96A73 305 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 IL17FQ96PD4 163 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 FZD8Q9H461 694 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ST6GALNAC4Q9H4F1 302 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 LRFN1Q9P244 771 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 COPZ2Q9P299 210 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 EDDM13A0A1B0GTR0 161 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 CAPNS1P04632 268 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 CD34P28906 385 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ERP29P30040 261 aaKnown RBP15.44■□□□□ 0.06
SSRP1-202ENST00000293880 DEFA6Q01524 100 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ANKRD54Q6NXT1 300 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 CCBE1Q6UXH8 406 aaPredicted RBP15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF599Q96NL3 588 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 OR1F2PQ96R84 312 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 SRRDQ9UH36 339 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 PCDHGB6Q9Y5F9 930 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 RAD51DO75771 328 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 CD1DP15813 335 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 DRD5P21918 477 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 HNF1BP35680 557 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 AFF3P51826 1226 aaKnown RBP15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ABHD18Q0P651 414 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ANKRD13BQ86YJ7 626 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 GID4Q8IVV7 300 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 UBQLNLQ8IYU4 475 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 NTAN1Q96AB6 310 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ZUFSPQ96AP4 578 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 LHPPQ9H008 270 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 MMP27Q9H306 513 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ZDHHC4Q9NPG8 344 aa15.44■□□□□ 0.06
SSRP1-202ENST00000293880 CXXC1Q9P0U4 656 aaPredicted RBP15.44■□□□□ 0.06
SSRP1-202ENST00000293880 ADAP00813 363 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 PRSS56P0CW18 603 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 PRKCAP17252 672 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 S1PR1P21453 382 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 SLAMF1Q13291 335 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 FIGNL1Q6PIW4 674 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 RPLP0P6Q8NHW5 317 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 SULT4A1Q9BR01 284 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 NEURL4Q96JN8 1562 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 IFNGR1P15260 489 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 HOXD12P35452 270 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 STK19P49842 368 aaPredicted RBP15.43■□□□□ 0.06
SSRP1-202ENST00000293880 HNRNPKP61978 463 aaKnown RBP eCLIP15.43■□□□□ 0.06
SSRP1-202ENST00000293880 C22orf39Q6P5X5 142 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 OR2T33Q8NG76 320 aa15.43■□□□□ 0.06
SSRP1-202ENST00000293880 TMEM121BQ9BXQ6 578 aaPredicted RBP15.43■□□□□ 0.06
SSRP1-202ENST00000293880 NELFAQ9H3P2 528 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms