RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 USP9XQ93008 2570 aaPredicted RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 TLDC2A0PJX2 215 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 PINLYPA6NC86 204 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 TMEM200CA6NKL6 621 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 MANBAO00462 879 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 CDK2AP1O14519 115 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 PGRMC2O15173 223 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 PROM1O43490 865 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 DYRK3O43781 588 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 PEX1O43933 1283 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 HS6ST1O60243 411 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF354AO60765 605 aaPredicted RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 SLC19A2O60779 497 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 ERAL1O75616 437 aaKnown RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 PDE9AO76083 593 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 ESRRBO95718 433 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 MYL2P10916 166 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 ATP5F1P24539 256 aaPredicted RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 PIK3R1P27986 724 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 MAPK12P53778 367 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 RNF4P78317 190 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 BTKQ06187 659 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 CUL3Q13618 768 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 NNATQ16517 81 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 C3AR1Q16581 482 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF678Q5SXM1 525 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 C6orf163Q5TEZ5 329 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 TMEM64Q6YI46 380 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 RNF111Q6ZNA4 994 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 TIFABQ6ZNK6 161 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 MAMDC2Q7Z304 686 aaPredicted RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 TMEM151AQ8N4L1 468 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 C1orf52Q8N6N3 182 aaKnown RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 MORN4Q8NDC4 146 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 PSD4Q8NDX1 1056 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 OR5M3Q8NGP4 307 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 DNAJB8Q8NHS0 232 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 RBM18Q96H35 190 aaKnown RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 SENP5Q96HI0 755 aaPredicted RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 GPR137Q96N19 417 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 NTMT1Q9BV86 223 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 DDX31Q9H8H2 851 aaKnown RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 TIMMDC1Q9NPL8 285 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 DEPPQ9NTK1 212 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 MS4A12Q9NXJ0 267 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 MYOTQ9UBF9 498 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 TRPS1Q9UHF7 1281 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 EMCNQ9ULC0 261 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 SNX6Q9UNH7 406 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 YARS2Q9Y2Z4 477 aaKnown RBP9.06□□□□□ -0.96
CCDC58-201ENST00000291458 ASB4Q9Y574 426 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 TIMM22Q9Y584 194 aa9.06□□□□□ -0.96
CCDC58-201ENST00000291458 LRRK2Q5S007 2527 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 RELNP78509 3460 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 SETXQ7Z333 2677 aaKnown RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 EXPH5Q8NEV8 1989 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 ASPDHA6ND91 283 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 FOXE1O00358 373 aaPredicted RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 GLRA3O75311 464 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 CRCPO75575 148 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 SEMA3DO95025 777 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 GPR75O95800 540 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 MLYCDO95822 493 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 STSP08842 583 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 CCL3P10147 92 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 ESRRAP11474 423 aaPredicted RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 NT5EP21589 574 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 SSTR4P31391 388 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 TRHRP34981 398 aaPredicted RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 HSD17B3P37058 310 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 DNASE1L1P49184 302 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 NR0B1P51843 470 aaKnown RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 CASP6P55212 293 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 VSNL1P62760 191 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 IGLV3-21P80748 117 aaPredicted RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 HMGCS1Q01581 520 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 GALNT1Q10472 559 aaPredicted RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 RASA2Q15283 850 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 GGTA1PQ4G0N0 100 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 NDUFAF5Q5TEU4 345 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 PRAMEF20Q5VT98 475 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 MRM1Q6IN84 353 aaKnown RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 METTL2BQ6P1Q9 378 aaKnown RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 SLC29A4Q7RTT9 530 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 PAGE2Q7Z2X7 111 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 FAM13CQ8NE31 585 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 MZB1Q8WU39 189 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 TANKQ92844 425 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 RIT1Q92963 219 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 KLHL29Q96CT2 875 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 CCDC120Q96HB5 630 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 JSRP1Q96MG2 331 aaPredicted RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF382Q96SR6 550 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 BRINP2Q9C0B6 783 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 ANKZF1Q9H8Y5 726 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 L2HGDHQ9H9P8 463 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 MID1IP1Q9NPA3 183 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 AHSPQ9NZD4 102 aa9.05□□□□□ -0.96
CCDC58-201ENST00000291458 SUCOQ9UBS9 1254 aaKnown RBP9.05□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF225Q9UK10 706 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms