RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 FAM172BPA6NC97 362 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 H0Y8X5 98 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 XKRYO14609 159 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 TSPAN9O75954 239 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 C1orf105O95561 183 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 GNRH1P01148 92 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 PRLP01236 227 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 C1QAP02745 245 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 F11P03951 625 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 PRKAR1AP10644 381 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 MYF6P23409 242 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 DHPSP49366 369 aaPredicted RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 CDH11P55287 796 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 RHAGQ02094 409 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 SQSTM1Q13501 440 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 SUZ12Q15022 739 aaKnown RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 ATG9BQ674R7 924 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 MZT2BQ6NZ67 158 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 PLET1Q6UQ28 207 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 MRPL43Q8N983 215 aaKnown RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 LRR1Q96L50 414 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 HHIPQ96QV1 700 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 RACGAP1Q9H0H5 632 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 OR51E2Q9H255 320 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 IKZF5Q9H5V7 419 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 ARNT2Q9HBZ2 717 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 TRPV5Q9NQA5 729 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 RLIMQ9NVW2 624 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 HCN4Q9Y3Q4 1203 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 GPC6Q9Y625 555 aaPredicted RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 GMEB1Q9Y692 573 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 CSNK1G3Q9Y6M4 447 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 SGK494L7N484 410 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 DOK2O60496 412 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 ZNF821O75541 412 aaPredicted RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 C8BP07358 591 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 PIM1P11309 404 aaPredicted RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 ANXA8P13928 327 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 RORCP51449 518 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 RPL26P61254 145 aaKnown RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 RPS21P63220 83 aaKnown RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 CDK5R2Q13319 367 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 ENPP2Q13822 863 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 FLYWCH1Q4VC44 716 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 OR4C11Q6IEV9 310 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 ZNF783Q6ZMS7 281 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 SPRED2Q7Z698 418 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 ZSWIM9Q86XI8 627 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 TMEM102Q8N9M5 508 aaPredicted RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 CHST4Q8NCG5 386 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 PIK3R3Q92569 461 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 PCBD2Q9H0N5 130 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 EXO5Q9H790 373 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 PTBP2Q9UKA9 531 aaKnown RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 TCRBV3S1A0A5B6 114 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 KIAA0513O60268 411 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PLGP00747 810 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 UQCRC2P22695 453 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 HRH2P25021 359 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 DNAJB1P25685 340 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 RCVRNP35243 200 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 OR12D2P58182 307 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 YBX1P67809 324 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 EXOSC7Q15024 291 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 LTB4RQ15722 352 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ZNF791Q3KP31 576 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 PIP5KL1Q5T9C9 394 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 OR5M10Q6IEU7 315 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 CEP68Q76N32 757 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 LSRQ86X29 649 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 TEX26Q8N6G2 289 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 BBS10Q8TAM1 723 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 TFAP2CQ92754 450 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 LGALS12Q96DT0 336 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SLC17A9Q9BYT1 436 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 DMRT3Q9NQL9 472 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 CENPMQ9NSP4 180 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 TNFRSF10DQ9UBN6 386 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 MRPS33Q9Y291 106 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 PCDHA9Q9Y5H5 950 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 FAM186AA6NE01 2351 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 HYAL3O43820 417 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 PRAMEF10O60809 474 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 KRT33AO76009 404 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 IFNGP01579 166 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 EDNRAP25101 427 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PIK3CBP42338 1070 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 MAN2A2P49641 1150 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 OR2B6P58173 313 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 VLDLRP98155 873 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 IRF4Q15306 451 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SYPL1Q16563 259 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SLC5A12Q1EHB4 618 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 MANEALQ5VSG8 457 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 AMIGO1Q86WK6 493 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PROKR2Q8NFJ6 384 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 WDR20Q8TBZ3 569 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PIP5K1AQ99755 562 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 TM9SF2Q99805 663 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms