RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 INTS6Q9UL03 887 aaKnown RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 CCL26Q9Y258 94 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 LOC100509620A0A075B734 347 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 C2orf92A0A1B0GVN3 265 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 K7ERQ8 282 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 HMGA1P17096 107 aaKnown RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 LEPRP48357 1165 aaKnown RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 AP1S2P56377 157 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 CDK5R2Q13319 367 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 TOMM20Q15388 145 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 SPHARQ15513 63 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 OR4F6Q8NGB9 312 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 GEMIN6Q8WXD5 167 aaKnown RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 EXOSC8Q96B26 276 aaKnown RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PTERQ96BW5 349 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 TRPV4Q9HBA0 871 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PEX12O00623 359 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 HIST1H2ABP04908 130 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC35E2BP0CK96 405 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 HK1P19367 917 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 CELP19835 753 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 RAB2AP61019 212 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 BTN1A1Q13410 526 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 SNTA1Q13424 505 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ATAD3CQ5T2N8 411 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 HIST3H2AQ7L7L0 130 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ZSWIM9Q86XI8 627 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 DCUN1D3Q8IWE4 304 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PDZD9Q8IXQ8 264 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 NXPE1Q8N323 547 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 CCDC107Q8WV48 283 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 MAFIPQ8WZ33 124 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 HIST1H2ACQ93077 130 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 CNDP2Q96KP4 475 aaKnown RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 TCF7L1Q9HCS4 588 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 WNT16Q9UBV4 365 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PCDHGA8Q9Y5G5 932 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 BCAT2O15382 392 aaPredicted RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 OR1F1O43749 312 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 APOC1P02654 83 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 NFKB2Q00653 900 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 GRK1Q15835 563 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 TMEM44Q2T9K0 475 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF648Q5T619 568 aaPredicted RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 KDM1BQ8NB78 822 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 CAMKVQ8NCB2 501 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 OR2T35Q8NGX2 323 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 RIT1Q92963 219 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 LRCH3Q96II8 777 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 THAP10Q9P2Z0 257 aaPredicted RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ANXA2P2A6NMY6 339 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 AP1G1O43747 822 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 MTX2O75431 263 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PPM1BO75688 479 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 FCER2P06734 321 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ANXA2P07355 339 aaKnown RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 POU2F2P09086 479 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 BMP4P12644 408 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 JUPP14923 745 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ALDH3B2P48448 385 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ARFIP1P53367 373 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC3A1Q07837 685 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 NTRK2Q16620 822 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 FAM109BQ6ICB4 259 aaPredicted RBP10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ENPP6Q6UWR7 440 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 SPATC1Q76KD6 591 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PAQR7Q86WK9 346 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ARMC10Q8N2F6 343 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 METTL4Q8N3J2 472 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 DENND6BQ8NEG7 585 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 AIFM2Q9BRQ8 373 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF350Q9GZX5 532 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PPA2Q9H2U2 334 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 C3orf14Q9HBI5 128 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 NDUFAF4Q9P032 175 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 TNFRSF10DQ9UBN6 386 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 PADI2Q9Y2J8 665 aa10.87□□□□□ -0.67
NPC1L1-201ENST00000289547 WWP2O00308 870 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 H1F0P07305 194 aaKnown RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CD38P28907 300 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 PGDP52209 483 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 MINDY4Q4G0A6 757 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF311Q5JNZ3 666 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 EIF5AL1Q6IS14 154 aaKnown RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 SSX6Q7RTT6 188 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 UBQLNLQ8IYU4 475 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 ADGRG5Q8IZF4 528 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 KIAA1958Q8N8K9 716 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CHST14Q8NCH0 376 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 OR8J3Q8NGG0 315 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 NEIL3Q8TAT5 605 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 THAP6Q8TBB0 222 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 ADAMTS15Q8TE58 950 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC39A13Q96H72 371 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 NSUN5Q96P11 429 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms