RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 KRT6CP48668 564 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SLC18A1P54219 525 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 TRA2BP62995 288 aaKnown RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 AP2B1P63010 937 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 HMGCS1Q01581 520 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 ID2Q02363 134 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 ACTN3Q08043 901 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 FUT7Q11130 342 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 IFT88Q13099 833 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SLC13A2Q13183 592 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 TUBA3CQ13748 450 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 RCN2Q14257 317 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SPRED3Q2MJR0 410 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SGO1Q5FBB7 561 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 ARL13AQ5H913 290 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 NDUFAF5Q5TEU4 345 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 MFSD4BQ5TF39 518 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 FCRLBQ6BAA4 426 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 TUBA3EQ6PEY2 450 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 CLNKQ7Z7G1 428 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 RPS19BP1Q86WX3 136 aaKnown RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 NUDT13Q86X67 352 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 ST13P4Q8IZP2 240 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 BEST3Q8N1M1 668 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 C1orf52Q8N6N3 182 aaKnown RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF615Q8N8J6 731 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 C7orf57Q8NEG2 295 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 OR2T11Q8NH01 316 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 OR8K3Q8NH51 312 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 PPWD1Q96BP3 646 aaKnown RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 TLCD1Q96CP7 247 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SCMH1Q96GD3 660 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SENP5Q96HI0 755 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 METTL2AQ96IZ6 378 aaKnown RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF354BQ96LW1 612 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 CDCP1Q9H5V8 836 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SH2D2AQ9NP31 389 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 TAS2R7Q9NYW3 318 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SENP1Q9P0U3 644 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 PHF11Q9UIL8 331 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 MCM8Q9UJA3 840 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 HAO1Q9UJM8 370 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 MRPS33Q9Y291 106 aaKnown RBP8.52□□□□□ -1.05
HMGN1-201ENST00000288344 STK38LQ9Y2H1 464 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SETXQ7Z333 2677 aaKnown RBP8.51□□□□□ -1.05
HMGN1-201ENST00000288344 A0A1W2PNR3 127 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 ASPDHA6ND91 283 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 OR5H15A6NDH6 313 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 GLOD5A6NK44 160 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 A8MUA0 341 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 PYCARD-AS1I3L0S3 204 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 NADKO95544 446 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-201ENST00000288344 UROSP10746 265 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 IDH3AP50213 366 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 IFFO1Q0D2I5 559 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 DUSP8Q13202 625 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF169Q14929 603 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-201ENST00000288344 MEP1AQ16819 746 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF750Q32MQ0 723 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 KRT71Q3SY84 523 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 KANK2Q63ZY3 851 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 SLC48A1Q6P1K1 146 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 SCIMPQ6UWF3 145 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 TREML4Q6UXN2 200 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 C16orf47Q6ZP98 133 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-201ENST00000288344 BTLAQ7Z6A9 289 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 TMEM132CQ8N3T6 1108 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 CISD2Q8N5K1 135 aaKnown RBP8.51□□□□□ -1.05
HMGN1-201ENST00000288344 CCNYL1Q8N7R7 359 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF441Q8N8Z8 693 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 OR14A16Q8NHC5 309 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 SLC2A12Q8TD20 617 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 TM9SF4Q92544 642 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 NCLNQ969V3 563 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 CNRIP1Q96F85 164 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-201ENST00000288344 VMP1Q96GC9 406 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 FBXL20Q96IG2 436 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 COPS7BQ9H9Q2 264 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-201ENST00000288344 CXorf21Q9HAI6 301 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 KCNK13Q9HB14 408 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 TMBIM4Q9HC24 238 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 ASF1BQ9NVP2 202 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 AHSPQ9NZD4 102 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 MYOTQ9UBF9 498 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 ZDHHC2Q9UIJ5 367 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 SLC12A4Q9UP95 1085 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 PTGDR2Q9Y5Y4 395 aa8.51□□□□□ -1.05
HMGN1-201ENST00000288344 GTF3C1Q12789 2109 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 ADGRG4Q8IZF6 3080 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 C1orf226A1L170 272 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 A8MUI8 341 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 C17orf105B2RV13 164 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 TCP11X1B4DZS4 312 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 BIRC5O15392 142 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 ITM2AO43736 263 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 CT62P0C5K7 136 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 NR2F6P10588 404 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 ALOX15P16050 662 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-201ENST00000288344 H2AFXP16104 143 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-201ENST00000288344 TACR1P25103 407 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms