RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ROBO1Q9Y6N7 1651 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 TRIM64A6NGJ6 449 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 TRIM64BA6NI03 449 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 B4DGG1 531 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 NUPL2O15504 423 aaKnown RBP15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 ITGA5P08648 1049 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 C1GALT1C1LP0DN25 315 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 ETFAP13804 333 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 TNFRSF1BP20333 461 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 ACRV1P26436 265 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 ERVPABLB-1P60509 514 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 Q8N9G6 341 aaPredicted RBP15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 ZNF461Q8TAF7 563 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 OR5P2Q8WZ92 322 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 RTP4Q96DX8 246 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 HSPA12BQ96MM6 686 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 EPYCQ99645 322 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 OLAHQ9NV23 265 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 PADI2Q9Y2J8 665 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 UGT2A1Q9Y4X1 527 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 MON2Q7Z3U7 1717 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 ZNF860A6NHJ4 632 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 CD9P21926 228 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 PRMT2P55345 433 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 UPP1Q16831 310 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 ESCO2Q56NI9 601 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 DTWD1Q8N5C7 304 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 RASGEF1AQ8N9B8 481 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 NETO1Q8TDF5 533 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 TMEM41AQ96HV5 264 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 SCGB3A2Q96PL1 93 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 PCTPQ9UKL6 214 aa15.76■□□□□ 0.11
SH3RF1-201ENST00000284637 LYRM1O43325 122 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 PPM1BO75688 479 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 MAGEA11P43364 429 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 IRF5Q13568 498 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 GXYLT1Q4G148 440 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 GID4Q8IVV7 300 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 CADM3Q8N126 398 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 SLC5A8Q8N695 610 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 OR6N2Q8NGY6 317 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 FUBP1Q96AE4 644 aaKnown RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 DHRS4Q9BTZ2 278 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 MAGIXQ9H6Y5 334 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 ZDHHC4Q9NPG8 344 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 IGSF5Q9NSI5 407 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 ACSL5Q9ULC5 683 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 TMEM5Q9Y2B1 443 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 A0A1B0GVI7 797 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 HOXD8P13378 290 aaPredicted RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 RAB3BP20337 219 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 PKLRP30613 574 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 GCGRP47871 477 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 RHEBQ15382 184 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 LY6G5CQ5SRR4 150 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 HS3ST5Q8IZT8 346 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 METTL4Q8N3J2 472 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 GJD2Q9UKL4 321 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 STUB1Q9UNE7 303 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 INPPL1O15357 1258 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 CSTBP04080 98 aaKnown RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 AGXTP21549 392 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 OXTRP30559 389 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 OR2T35Q8NGX2 323 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 RHBDF1Q96CC6 855 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 ELOVL2Q9NXB9 296 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 MYH11P35749 1972 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 JUPP14923 745 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 CD68P34810 354 aaPredicted RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 ETV1P50549 477 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 NRG3P56975 720 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 ZXDBP98169 803 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 SNTB2Q13425 540 aaKnown RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 COL9A2Q14055 689 aaPredicted RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 CHDHQ8NE62 594 aaPredicted RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 BBS10Q8TAM1 723 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 L3HYPDHQ96EM0 354 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 CACNG6Q9BXT2 260 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 MRPL15Q9P015 296 aaKnown RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 MGAT4CQ9UBM8 478 aa15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 BAZ2AQ9UIF9 1905 aaKnown RBP15.75■□□□□ 0.11
SH3RF1-201ENST00000284637 C1orf196B1AJZ1 125 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 HCKP08631 526 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 GTF2F2P13984 249 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 RHCEP18577 417 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 CRHBPP24387 322 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 SCAPQ12770 1279 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 DNM1P34Q6PK57 102 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 OR13F1Q8NGS4 319 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 NR4A3Q92570 626 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 PAAF1Q9BRP4 392 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 NPIPA5E9PKD4 350 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 PRKYO43930 277 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 RPS5P46782 204 aaKnown RBP15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 GATMP50440 423 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 FOXA1P55317 472 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 BTN1A1Q13410 526 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 CDK10Q15131 360 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 CCDC58Q4VC31 144 aa15.74■□□□□ 0.11
SH3RF1-201ENST00000284637 OR5M3Q8NGP4 307 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms