RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 ZNF57Q68EA5 555 aaPredicted RBP7.25□□□□□ -1.25
TRIM6-201ENST00000278302 C22orf42Q6IC83 251 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 C22orf39Q6P5X5 142 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 TMIGD1Q6UXZ0 262 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 ZNF367Q7RTV3 350 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 KANSL1Q7Z3B3 1105 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 CPXM2Q8N436 756 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 MS4A15Q8N5U1 240 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 ZNF655Q8N720 491 aaPredicted RBP7.25□□□□□ -1.25
TRIM6-201ENST00000278302 SYT14Q8NB59 555 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 OR9Q1Q8NGQ5 310 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 PTP4A1Q93096 173 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 AP2M1Q96CW1 435 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 CMTM7Q96FZ5 175 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 HSH2DQ96JZ2 352 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 WDFY2Q96P53 400 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 DEFB118Q96PH6 123 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 RAD9AQ99638 391 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 EBPLQ9BY08 206 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 GHITMQ9H3K2 345 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 DNAJC11Q9NVH1 559 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 GPRC5BQ9NZH0 403 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 B4GALT6Q9UBX8 382 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 PPIEQ9UNP9 301 aaKnown RBP7.25□□□□□ -1.25
TRIM6-201ENST00000278302 YARS2Q9Y2Z4 477 aaKnown RBP7.25□□□□□ -1.25
TRIM6-201ENST00000278302 PLXNA4Q9HCM2 1894 aa7.25□□□□□ -1.25
TRIM6-201ENST00000278302 TCRBV16S1A1N1A0A5B0 115 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 GRM6O15303 877 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 SGTAO43765 313 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 TRIM3O75382 744 aaPredicted RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 GNRH1P01148 92 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 PRKAR1AP10644 381 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 EPORP19235 508 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 LHCGRP22888 699 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 PSMA1P25786 263 aaKnown RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 RECQLP46063 649 aaPredicted RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 HAAOP46952 286 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 INPP1P49441 399 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 HNMTP50135 292 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 ABHD18Q0P651 414 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 CHIT1Q13231 466 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 IL18Q14116 193 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 LGALSLQ3ZCW2 172 aaPredicted RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 CDKL4Q5MAI5 379 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 MPP7Q5T2T1 576 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 FAHD1Q6P587 224 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 C19orf48Q6RUI8 117 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 PAQR6Q6TCH4 344 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 ATRAIDQ6UW56 229 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 ZNF600Q6ZNG1 722 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 ZNF621Q6ZSS3 439 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 KIAA0907Q7Z7F0 614 aaPredicted RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 DDX53Q86TM3 631 aaKnown RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 PDZD3Q86UT5 571 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 SYT12Q8IV01 421 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 VRK3Q8IV63 474 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 TMEM151BQ8IW70 566 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 FANK1Q8TC84 345 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 SORCS2Q96PQ0 1159 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 LYSMD1Q96S90 227 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 P2RY13Q9BPV8 354 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 NIPSNAP1Q9BPW8 284 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 CPPED1Q9BRF8 314 aaPredicted RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 TAPBPLQ9BX59 468 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 MED28Q9H204 178 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 ZCCHC4Q9H5U6 513 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 PLCXD1Q9NUJ7 323 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 KLHL42Q9P2K6 505 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 PLEKHB1Q9UF11 243 aaPredicted RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 TMCC3Q9ULS5 477 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 SAMD4AQ9UPU9 718 aaKnown RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 MAPRE3Q9UPY8 281 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 BAIAP2Q9UQB8 552 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 SLC22A23A1A5C7 686 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 SLC35F4A4IF30 521 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 AGAP14A8MT82 685 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 UPK3BL1B0FP48 263 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 UPK3BL2E5RIL1 263 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 WNT9AO14904 365 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 IFNA7P01567 189 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 C9P02748 559 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 GLAP06280 429 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 C1SP09871 688 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 FAM157BP0CG42 384 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 FOSL1P15407 271 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 SDC1P18827 310 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 CRYBB2P43320 205 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 KIR3DL1P43629 444 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 SPINT3P49223 89 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 VSX2P58304 361 aaPredicted RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 POLR2LP62875 67 aaKnown RBP7.24□□□□□ -1.25
TRIM6-201ENST00000278302 IRF8Q02556 426 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 ABRQ12979 859 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 LEXMQ3ZCV2 418 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 DDI2Q5TDH0 399 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 ZDHHC20Q5W0Z9 365 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 FRG2Q64ET8 278 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 MZT2BQ6NZ67 158 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 CNKSR3Q6P9H4 555 aa7.24□□□□□ -1.25
TRIM6-201ENST00000278302 RTL4Q6ZR62 310 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms