RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 FXYD6P3P58550 94 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 RPP30P78346 268 aaKnown RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 OR52E8Q6IFG1 317 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 BLOC1S3Q6QNY0 202 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 CCDC71LQ8N9Z2 235 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 TFGQ92734 400 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 RPL10LQ96L21 214 aaKnown RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 OR14A2Q96R54 314 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 DNAJC5Q9H3Z4 198 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 NSUN3Q9H649 340 aaKnown RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 C19orf12Q9NSK7 152 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 B4DGG1 531 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 ALPIP09923 528 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 HTR2BP41595 481 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 WDR45BQ5MNZ6 344 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 HACD4Q5VWC8 232 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 TTC24A2A3L6 582 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 LOC730098B7Z3J9 87 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 CH25HO95992 272 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 KLK3P07288 261 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 CD1DP15813 335 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 UQCRC1P31930 480 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 PRSS58Q8IYP2 241 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 LRIG1Q96JA1 1093 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 LDAHQ9H6V9 325 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 EVA1AQ9H8M9 152 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 XPNPEP1Q9NQW7 623 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 NFS1Q9Y697 457 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 C1orf196B1AJZ1 125 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 EIF3FO00303 357 aaPredicted RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 GNRHRP30968 328 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ENTPD1P49961 510 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 HNRNPFP52597 415 aaKnown RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF33BQ06732 778 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 NPRL3Q12980 569 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM156Q8N614 296 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF701Q9NV72 531 aaPredicted RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 DNAJC13O75165 2243 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 A0A1W2PPW3 197 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 C12orf71A8MTZ7 269 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 SCAMP2O15127 329 aaKnown RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 PEX14O75381 377 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 AHSGP02765 367 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 H2BFMP0C1H6 154 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 DRD2P14416 443 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ELK4P28324 431 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 CD34P28906 385 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 NFATC2Q13469 925 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 TIGD5Q53EQ6 642 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM236Q5W0B7 351 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM53Q6P2H8 277 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ZC3H3Q8IXZ2 948 aaKnown RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ALDH16A1Q8IZ83 802 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 SLC35F5Q8WV83 523 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ZDHHC12Q96GR4 267 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 CTPS2Q9NRF8 586 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ADAM18Q9Y3Q7 739 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 UNCXA6NJT0 531 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 GJE1A6NN92 205 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 POP7O75817 140 aaKnown RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 SLC16A8O95907 504 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 PAK4O96013 591 aaPredicted RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 CAV3P56539 151 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 MLLT1Q03111 559 aaPredicted RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 FPGSQ05932 587 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 RAB31Q13636 194 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 MOGSQ13724 837 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ENPP7Q6UWV6 458 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ZSCAN1Q8NBB4 408 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 NAXEQ8NCW5 288 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 RAB7BQ96AH8 199 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 SECISBP2Q96T21 854 aaKnown RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 C7orf50Q9BRJ6 194 aaKnown RBP7.65□□□□□ -1.19
LIMD1-201ENST00000273317 ARID1AO14497 2285 aa7.65□□□□□ -1.19
LIMD1-201ENST00000273317 TYROBPO43914 113 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 GGT1P19440 569 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 CD9P21926 228 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 WASP42768 502 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 LCN8Q6JVE9 175 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 MTFR2Q6P444 385 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 POGLUT1Q8NBL1 392 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 CNIH3Q8TBE1 160 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ARL6Q9H0F7 186 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SH3BGRL2Q9UJC5 107 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ZFR2Q9UPR6 939 aaKnown RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SLC1A7O00341 560 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 IL33O95760 270 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SYPL2Q5VXT5 272 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PRSS55Q6UWB4 352 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ACBD4Q8NC06 268 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 OR13J1Q8NGT2 312 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 MAPK15Q8TD08 544 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 JPH3Q8WXH2 748 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SNAPC3Q92966 411 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 CHD5Q8TDI0 1954 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 FAM230AA0A1W2PPH8 454 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM88BA6NKF7 163 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 TRAPPC6AO75865 159 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 APBB3O95704 486 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ADAP00813 363 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms