RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ELP4Q96EB1 424 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 SLC41A2Q96JW4 573 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 CIB1Q99828 191 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 BDH2Q9BUT1 245 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 NTN4Q9HB63 628 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 ZCCHC3Q9NUD5 404 aaKnown RBP15.4■□□□□ 0.06
TPM1-201ENST00000267996 TMEM9Q9P0T7 183 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 ZNF639Q9UID6 485 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 LRCH1Q9Y2L9 728 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 PATE3B3GLJ2 98 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 HMGN4O00479 90 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 ACOX3O15254 700 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 EMC8O43402 210 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 CHST10O43529 356 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 ZNF682O95780 498 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 FHP07954 510 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 TFPTP0C1Z6 253 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 AVPR2P30518 371 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 RPS26P62854 115 aaKnown RBP15.39■□□□□ 0.05
TPM1-201ENST00000267996 SHC2P98077 582 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 TP53BP2Q13625 1128 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 GPR19Q15760 415 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 CRB2Q5IJ48 1285 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 TNFAIP8L2Q6P589 184 aaPredicted RBP15.39■□□□□ 0.05
TPM1-201ENST00000267996 GALNT10Q86SR1 603 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 PACRGLQ8N7B6 248 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 TTC29Q8NA56 475 aaPredicted RBP15.39■□□□□ 0.05
TPM1-201ENST00000267996 SLC35G5Q96KT7 338 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 SLC29A1Q99808 456 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 VCXQ9H320 206 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 C8orf4Q9NR00 106 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 THUMPD1Q9NXG2 353 aaKnown RBP15.39■□□□□ 0.05
TPM1-201ENST00000267996 DNAJB9Q9UBS3 223 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 ADAMTS9Q9P2N4 1935 aa15.39■□□□□ 0.05
TPM1-201ENST00000267996 A0A0A6YYC8 382 aaPredicted RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 EME2A4GXA9 379 aaPredicted RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 I3L1I5 382 aaPredicted RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 PLOD2O00469 737 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ARHGAP33O14559 1287 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 GPR75O95800 540 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 CER1O95813 267 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 IFI6P09912 130 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 CPMP14384 443 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 PTGER1P34995 402 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 TXNL4AP83876 142 aaKnown RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 PRR5P85299 388 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 FOLH1Q04609 750 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 GRM7Q14831 915 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 MAPK11Q15759 364 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.38■□□□□ 0.05
TPM1-201ENST00000267996 CYBRD1Q53TN4 286 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 TMTC4Q5T4D3 741 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 GUSBP11Q6P575 273 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 TMEM107Q6UX40 140 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ZBTB49Q6ZSB9 765 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ZC3H7AQ8IWR0 971 aaKnown RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 METTL25Q8N6Q8 603 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 SLC38A5Q8WUX1 472 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ZNF597Q96LX8 424 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 C9orf16Q9BUW7 83 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 SPRTNQ9H040 489 aaPredicted RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 C3orf14Q9HBI5 128 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 IL1RAPQ9NPH3 570 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ANGPT4Q9Y264 503 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ZNF451Q9Y4E5 1061 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 TTC28Q96AY4 2481 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 SAC3D1A6NKF1 404 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 FAM227AF5H4B4 570 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 TOX3O15405 576 aaPredicted RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 PCDHGA12O60330 932 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 PORP16435 677 aaPredicted RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 NELFEP18615 380 aaKnown RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 AQP1P29972 269 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 SOX18P35713 384 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 MC3RP41968 323 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 GCGRP47871 477 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 KCNAB1Q14722 419 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ANGPT1Q15389 498 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 LTB4RQ15722 352 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 TRIM61Q5EBN2 209 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 PERM1Q5SV97 790 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 REEP3Q6NUK4 255 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 TLDC1Q6P9B6 456 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 PIWIL3Q7Z3Z3 882 aaKnown RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 OR4N5Q8IXE1 308 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 OR10Q1Q8NGQ4 319 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ADAMTS18Q8TE60 1221 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ANKRD9Q96BM1 317 aaPredicted RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 TAMM41Q96BW9 452 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 HSH2DQ96JZ2 352 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 NUDT22Q9BRQ3 303 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 OR51I1Q9H343 314 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 ZNF768Q9H5H4 540 aaKnown RBP15.38■□□□□ 0.05
TPM1-201ENST00000267996 ADPRHL2Q9NX46 363 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 OAZ3Q9UMX2 235 aa15.38■□□□□ 0.05
TPM1-201ENST00000267996 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 SOCS2O14508 198 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 CASC3O15234 703 aaKnown RBP15.37■□□□□ 0.05
TPM1-201ENST00000267996 SUV39H1O43463 412 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms