RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 RAI2Q9Y5P3 530 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 ABCD4O14678 606 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SIGLEC6O43699 453 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 MAFKO60675 156 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 BPIP17213 487 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 CNR2P34972 360 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 BDKRB1P46663 353 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 CCR6P51684 374 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 DEFA5Q01523 94 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 PPIGQ13427 754 aaKnown RBP eCLIP8.35□□□□□ -1.072e-6■■□□□ 12
VAPB-201ENST00000265619 ZBTB6Q15916 424 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 DGKKQ5KSL6 1271 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 ATG9BQ674R7 924 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 ZDHHC17Q8IUH5 632 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 CCDC117Q8IWD4 279 aaPredicted RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 RBFAQ8N0V3 343 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 KCT2Q8NC54 265 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 OR2T35Q8NGX2 323 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SEMA4CQ9C0C4 833 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 PPT2Q9UMR5 302 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SAMD4AQ9UPU9 718 aaKnown RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 PCDHGB7Q9Y5F8 929 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 TRABD2BA6NFA1 517 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 CHURC1-FNTBB4DL54 471 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SGCEO43556 437 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 CCNB2O95067 398 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 CCNDBP1O95273 360 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 KCNK5O95279 499 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 WDPCPO95876 746 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 ODC1P11926 461 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 IL1RNP18510 177 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 CD9P21926 228 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 MAPK1P28482 360 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 KDELR2P33947 212 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 TLE2Q04725 743 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 OPCMLQ14982 345 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 OR2G6Q5TZ20 316 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 RTN4RL1Q86UN2 441 aaPredicted RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 LAS2Q8IYD9 372 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 ZNF527Q8NB42 609 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 OR10G2Q8NGC3 310 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 MOSPD2Q8NHP6 518 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 RHEBL1Q8TAI7 183 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 NSMAFQ92636 917 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SLC38A2Q96QD8 506 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 PELOQ9BRX2 385 aaKnown RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 NTMT1Q9BV86 223 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SLC19A3Q9BZV2 496 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SLC39A8Q9C0K1 460 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 TFB2MQ9H5Q4 396 aaKnown RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 CLMPQ9H6B4 373 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 METTL17Q9H7H0 456 aaPredicted RBP8.35□□□□□ -1.07
VAPB-201ENST00000265619 ANKRA2Q9H9E1 313 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 BABAM2Q9NXR7 383 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SEC14L4Q9UDX3 406 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 KIF25Q9UIL4 384 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 SSR3Q9UNL2 185 aa8.35□□□□□ -1.07
VAPB-201ENST00000265619 A0A0U1RQF3 1178 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 C7orf66A4D0T2 115 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 C1SP09871 688 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 ANKRD34CP0C6C1 535 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 PEPDP12955 493 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 CCL5P13501 91 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 CBR1P16152 277 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 ATP6V1E1P36543 226 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 GDF5P43026 501 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 RECQLP46063 649 aaPredicted RBP8.34□□□□□ -1.07
VAPB-201ENST00000265619 EVX1P49640 407 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 CDH12P55289 794 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 ZNF528Q3MIS6 628 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 MTFR2Q6P444 385 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 CLEC20AQ6ZU45 233 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 RRM2BQ7LG56 351 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 KLHDC9Q8NEP7 349 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 KLHL5Q96PQ7 755 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 GPR21Q99679 349 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 ATF6BQ99941 703 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 HDHD2Q9H0R4 259 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 CFAP97Q9P2B7 532 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 RHCGQ9UBD6 479 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 NEU3Q9UQ49 428 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 TNFRSF11BO00300 401 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 GCM2O75603 506 aaPredicted RBP8.34□□□□□ -1.07
VAPB-201ENST00000265619 ALDOBP05062 364 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 PTAFRP25105 342 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 STK19P49842 368 aaPredicted RBP8.34□□□□□ -1.07
VAPB-201ENST00000265619 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 LHX8Q68G74 356 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 PRSS55Q6UWB4 352 aaPredicted RBP8.34□□□□□ -1.07
VAPB-201ENST00000265619 ALKAL1Q6UXT8 129 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 LRRTM3Q86VH5 581 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 CELF5Q8N6W0 485 aaKnown RBP8.34□□□□□ -1.07
VAPB-201ENST00000265619 BOLLQ8N9W6 283 aaKnown RBP8.34□□□□□ -1.07
VAPB-201ENST00000265619 TEX19Q8NA77 164 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 SIDT2Q8NBJ9 832 aaKnown RBP8.34□□□□□ -1.07
VAPB-201ENST00000265619 OR56A4Q8NGH8 313 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 OR52N1Q8NH53 320 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 STAG3L4Q8TBR4 150 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 PHOSPHO2Q8TCD6 241 aa8.34□□□□□ -1.07
VAPB-201ENST00000265619 EEF1AKMT1Q8WVE0 214 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms