RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 TRAPPC2P0DI81 140 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 TRAPPC2BP0DI82 140 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 EDNRAP25101 427 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 TIA1P31483 386 aaKnown RBP eCLIP14.4□□□□□ -0.13e-13■■■■■ 52.3
CASC3-201ENST00000264645 TGM4P49221 684 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 ST3GAL3Q11203 375 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 ZNF772Q68DY9 489 aaPredicted RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 TSEN15Q8WW01 171 aaKnown RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 ACOT12Q8WYK0 555 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 TXNL4BQ9NX01 149 aaKnown RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 KIAA1522Q9P206 1035 aaPredicted RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 GATBO75879 557 aaKnown RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 RPLP2P05387 115 aaKnown RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 RPL17P18621 184 aaKnown RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 SCGB2B2Q4G0G5 96 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 MPPE1Q53F39 396 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 TOR2AQ5JU69 321 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 S100A16Q96FQ6 103 aaKnown RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 ZIC5Q96T25 663 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 METTL17Q9H7H0 456 aaPredicted RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 PRDM9Q9NQV7 894 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 UPB1Q9UBR1 384 aa14.4□□□□□ -0.1
CASC3-201ENST00000264645 NOP16Q9Y3C1 178 aaKnown RBP14.4□□□□□ -0.1
CASC3-201ENST00000264645 ZNF670-ZNF695F2Z2N8 137 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 F5H0A9 414 aaPredicted RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 JUPP14923 745 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 SLC19A1P41440 591 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 OR12D2P58182 307 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 NKG7Q16617 165 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 ADGRF1Q5T601 910 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 IDO2Q6ZQW0 420 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 ACBD7Q8N6N7 88 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 ZNF436Q9C0F3 470 aaPredicted RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 TMEM27Q9HBJ8 222 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 SCAMP2O15127 329 aaKnown RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 KDELR3O43731 214 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 GPX5O75715 221 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 STATHP02808 62 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 CBSLP0DN79 551 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 PTPN6P29350 595 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 TLX1P31314 330 aaPredicted RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 CBSP35520 551 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 MLLT11Q13015 90 aaPredicted RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 PRSS36Q5K4E3 855 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 GPRC6AQ5T6X5 926 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 OTOP2Q7RTS6 562 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 BCDIN3DQ7Z5W3 292 aaKnown RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 TRMT10AQ8TBZ6 339 aaKnown RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 UPF1Q92900 1129 aaKnown RBP eCLIP14.39□□□□□ -0.111e-8■■■□□ 18.7
CASC3-201ENST00000264645 WRAP53Q9BUR4 548 aaKnown RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 XKR8Q9H6D3 395 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 A0A1W2PPL8 197 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 PLSCR1O15162 318 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 ATP1B2P14415 290 aaPredicted RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 VAMP1P23763 118 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 KHKP50053 298 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 COL28A1Q2UY09 1125 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 RPS26P11Q5JNZ5 115 aaPredicted RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 SLC30A6Q6NXT4 461 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 PAQR9Q6ZVX9 377 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 PEG10Q86TG7 708 aaKnown RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 METTL3Q86U44 580 aaKnown RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 ADGRG2Q8IZP9 1017 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 OR8S1Q8NH09 359 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 RAET1EQ8TD07 263 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 IMP3Q9NV31 184 aaKnown RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 ZNF705EA8MWA4 302 aaPredicted RBP14.39□□□□□ -0.11
CASC3-201ENST00000264645 PDCD5O14737 125 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 PI15O43692 258 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 OR12D1P0DN82 309 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 SKP1P63208 163 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 PYHIN1Q6K0P9 492 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 RNF180Q86T96 592 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 MDGA1Q8NFP4 955 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 OR52N2Q8NGI0 321 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 ARRDC2Q8TBH0 407 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 THSD1Q9NS62 852 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 POT1Q9NUX5 634 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 PLEKHA6Q9Y2H5 1048 aa14.39□□□□□ -0.11
CASC3-201ENST00000264645 C2orf78A6NCI8 922 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 GLOD5A6NK44 160 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 FAM227AF5H4B4 570 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 SCG5P05408 212 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 IL3P08700 152 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 INHBBP09529 407 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 SLC35G4P0C7Q5 338 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 ZDHHC20Q5W0Z9 365 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 ZCCHC12Q6PEW1 402 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 FCAMRQ8WWV6 532 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 TCEAL4Q96EI5 215 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 FERD3LQ96RJ6 166 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 GMLQ99445 158 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 C16orf70Q9BSU1 422 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 KCNK12Q9HB15 430 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 ZSCAN32Q9NX65 697 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 NDRG2Q9UN36 371 aaKnown RBP14.38□□□□□ -0.11
CASC3-201ENST00000264645 PTGESO14684 152 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 B3GALT4O96024 378 aa14.38□□□□□ -0.11
CASC3-201ENST00000264645 HOXD8P13378 290 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms