RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 KCNN3Q9UGI6 736 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 MUTYHQ9UIF7 546 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 SPEF1Q9Y4P9 236 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 MUC22E2RYF6 1773 aaPredicted RBP21.46■■□□□ 1.03
MCF2L-201ENST00000261963 A0A1W2PRB8 838 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 ZNF780AO75290 641 aaPredicted RBP21.46■■□□□ 1.03
MCF2L-201ENST00000261963 PTHP01270 115 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 STSP08842 583 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 CHI3L1P36222 383 aaPredicted RBP21.46■■□□□ 1.03
MCF2L-201ENST00000261963 PXNP49023 591 aaPredicted RBP21.46■■□□□ 1.03
MCF2L-201ENST00000261963 TOR1AIP1Q5JTV8 583 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 TRIM40Q6P9F5 258 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 LCTLQ6UWM7 567 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 ERN2Q76MJ5 926 aaKnown RBP21.46■■□□□ 1.03
MCF2L-201ENST00000261963 PDZD3Q86UT5 571 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 SNAPC3Q92966 411 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 UBE2E3Q969T4 207 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 TMEM245Q9H330 911 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 THSD1Q9NS62 852 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 DEC1Q9P2X7 70 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 SLC23A2Q9UGH3 650 aa21.46■■□□□ 1.03
MCF2L-201ENST00000261963 A0A1W2PQ72 361 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 POLR1CO15160 346 aaPredicted RBP21.45■■□□□ 1.02
MCF2L-201ENST00000261963 RGS5O15539 181 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 PTX3P26022 381 aaPredicted RBP21.45■■□□□ 1.02
MCF2L-201ENST00000261963 GGT2P36268 569 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 CDH12P55289 794 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 PCBP3P57721 371 aaKnown RBP21.45■■□□□ 1.02
MCF2L-201ENST00000261963 CYP4F2P78329 520 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 SPIBQ01892 262 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 EXOC3L2Q2M3D2 409 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 TIMM50Q3ZCQ8 353 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 FAM180BQ6P0A1 224 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 SLC9B2Q86UD5 537 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 C12orf76Q8N812 135 aaPredicted RBP21.45■■□□□ 1.02
MCF2L-201ENST00000261963 ZFAND1Q8TCF1 268 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 CRELD1Q96HD1 420 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 MAP6Q96JE9 813 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 BEX2Q9BXY8 128 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 ATP13A2Q9NQ11 1180 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 GPR83Q9NYM4 423 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 LINC00854A0A1B0GVQ3 168 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 LINC01553A4QN01 128 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 CCDC182A6NF36 153 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 J3KTA2 159 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 ARHGEF9O43307 516 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 IL12RB1P42701 662 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 CRISP3P54108 245 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 CD83Q01151 205 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 TARDBPQ13148 414 aaKnown RBP eCLIP21.45■■□□□ 1.02
MCF2L-201ENST00000261963 CRB2Q5IJ48 1285 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 TMEM240Q5SV17 173 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 IKBIPQ70UQ0 350 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 RAD51AP1Q96B01 352 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 COX14Q96I36 57 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 ZDHHC4Q9NPG8 344 aa21.45■■□□□ 1.02
MCF2L-201ENST00000261963 PRAMEF33A0A0G2JMD5 474 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 B8ZZF3 427 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 PRAMEF10O60809 474 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 ARAFP10398 606 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 ERP29P30040 261 aaKnown RBP21.44■■□□□ 1.02
MCF2L-201ENST00000261963 SOAT1P35610 550 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 UBE3AQ05086 875 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 BAK1Q16611 211 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 ZNF630Q2M218 657 aaPredicted RBP21.44■■□□□ 1.02
MCF2L-201ENST00000261963 FAM214AQ32MH5 1076 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 FAM78AQ5JUQ0 283 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 ADGRF3Q8IZF5 1079 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 BADQ92934 168 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 PPP1R16AQ96I34 528 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 NIPSNAP1Q9BPW8 284 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 SLC22A4Q9H015 551 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 SNX7Q9UNH6 387 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 PCDHGA2Q9Y5H1 932 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 OR6C70A6NIJ9 312 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 KELP23276 732 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 MICAQ29983 383 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 CDONQ4KMG0 1287 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 LGI4Q8N135 537 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 CXorf36Q9H7Y0 433 aa21.44■■□□□ 1.02
MCF2L-201ENST00000261963 EFCAB10A6NFE3 127 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 PLPP1O14494 284 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 RECKO95980 971 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 P2RY2P41231 377 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 MLLT3P42568 568 aaPredicted RBP21.43■■□□□ 1.02
MCF2L-201ENST00000261963 NUDT6P53370 316 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 ZMAT1Q5H9K5 638 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 DCUN1D3Q8IWE4 304 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 TP53I13Q8NBR0 393 aaPredicted RBP21.43■■□□□ 1.02
MCF2L-201ENST00000261963 SMG7Q92540 1137 aaKnown RBP21.43■■□□□ 1.02
MCF2L-201ENST00000261963 TM7SF3Q9NS93 570 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 V9GYH0 126 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 NFATC1O95644 943 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 RB1P06400 928 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 ERGP11308 486 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 XCR1P46094 333 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 FAPQ12884 760 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 EIF4HQ15056 248 aaKnown RBP21.43■■□□□ 1.02
MCF2L-201ENST00000261963 IDO2Q6ZQW0 420 aa21.43■■□□□ 1.02
MCF2L-201ENST00000261963 ZNF367Q7RTV3 350 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms