RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 MDH1P40925 334 aaKnown RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SLC1A3P43003 542 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 VEGFCP49767 419 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ETV1P50549 477 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 BACE1P56817 501 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 PRKCEQ02156 737 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CHIT1Q13231 466 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF177Q13360 481 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 MSLNQ13421 630 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 IMMTQ16891 758 aaKnown RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 LRRC23Q53EV4 343 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RIPPLY2Q5TAB7 128 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 HHATQ5VTY9 493 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 GDPGP1Q6ZNW5 385 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 LRRTM1Q86UE6 522 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CTAGE6Q86UF2 777 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SLC43A2Q8N370 569 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 MAPK1IP1LQ8NDC0 245 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 OR9Q2Q8NGE9 314 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ACMSDQ8TDX5 336 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SMPDL3AQ92484 453 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 PRCCQ92733 491 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 DTNBP1Q96EV8 351 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 C5orf30Q96GV9 206 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF599Q96NL3 588 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RBM14Q96PK6 669 aaKnown RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SH3GL3Q99963 347 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 GCOM2Q9BZD3 368 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 STMN4Q9H169 189 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RIBC2Q9H4K1 309 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 AKIRIN1Q9H9L7 192 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CRLF2Q9HC73 371 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RRAGDQ9NQL2 400 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 PRMT8Q9NR22 394 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 GLRX2Q9NS18 164 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 THEGQ9P2T0 379 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 KLK11Q9UBX7 282 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 MAD2L2Q9UI95 211 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 FBXW2Q9UKT8 454 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ASB3Q9Y575 518 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ETV7Q9Y603 341 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 IGHV4-30-2A0A087WSY4 118 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 ARPC4-TTLL3A0A0A6YYG9 625 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 A0A1B0GWJ7 208 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 ANHXE9PGG2 379 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 H7C423 109 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 TRAFD1O14545 582 aaPredicted RBP3.69□□□□□ -1.82
CCDC54-201ENST00000261058 CXCL11O14625 94 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 SPOPO43791 374 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 YEATS4O95619 227 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 PAHP00439 452 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 KRT8P05787 483 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 ANPEPP15144 967 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 CYP3A5P20815 502 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 GJB2P29033 226 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 GDI1P31150 447 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 CTNNB1P35222 781 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 NDST2P52849 883 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 UCP2P55851 309 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 NME5P56597 212 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 ERVK-16P61578 105 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 DHODHQ02127 395 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 GABPAQ06546 454 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 GABPB1Q06547 395 aaPredicted RBP3.69□□□□□ -1.82
CCDC54-201ENST00000261058 ELP6Q0PNE2 266 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 GPM6BQ13491 265 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 MEF2DQ14814 521 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 FAM189A2Q15884 450 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 CLPPQ16740 277 aaPredicted RBP3.69□□□□□ -1.82
CCDC54-201ENST00000261058 CD164L2Q6UWJ8 174 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 LCLAT1Q6UWP7 414 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 TMEM126BQ8IUX1 230 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 KDM8Q8N371 416 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 SFRP1Q8N474 314 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 SPERTQ8NA61 448 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 AQP11Q8NBQ7 271 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 OR13C5Q8NGS8 318 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 RPLP0P6Q8NHW5 317 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 ERMNQ8TAM6 284 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 URGCPQ8TCY9 931 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.69□□□□□ -1.82
CCDC54-201ENST00000261058 TMEM186Q96B77 213 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 MRPL38Q96DV4 380 aaKnown RBP3.69□□□□□ -1.82
CCDC54-201ENST00000261058 ATXN7L3BQ96GX2 97 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 AGAP4Q96P64 663 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 LGMNQ99538 433 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 SSX3Q99909 188 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 PINK1Q9BXM7 581 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 NAPBQ9H115 298 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 UPF3AQ9H1J1 476 aaKnown RBP3.69□□□□□ -1.82
CCDC54-201ENST00000261058 FANCEQ9HB96 536 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 THAP10Q9P2Z0 257 aaPredicted RBP3.69□□□□□ -1.82
CCDC54-201ENST00000261058 PSORS1C1Q9UIG5 152 aa3.69□□□□□ -1.82
CCDC54-201ENST00000261058 V9GYY5 206 aaPredicted RBP3.69□□□□□ -1.82
CCDC54-201ENST00000261058 TDRD15B5MCY1 1934 aaKnown RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 FER1L5A0AVI2 2057 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 A8MU76 341 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 NTN3O00634 580 aaPredicted RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 TFECO14948 347 aaPredicted RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 IDH3BO43837 385 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms