RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ESRP1Q6NXG1 681 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 SLC29A4Q7RTT9 530 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 CBLN2Q8IUK8 224 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ARMC10Q8N2F6 343 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 STXBP6Q8NFX7 210 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 OR8J3Q8NGG0 315 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 OR8J1Q8NGP2 316 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 OR2V1Q8NHB1 315 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 CPT1CQ8TCG5 803 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 PAQR8Q8TEZ7 354 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 CCDC107Q8WV48 283 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZCCHC14Q8WYQ9 949 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 LARP4BQ92615 738 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 TADA1Q96BN2 335 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 TEAD3Q99594 435 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 PRRT1Q99946 306 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 HIPK2Q9H2X6 1198 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ACSS3Q9H6R3 686 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 CHST11Q9NPF2 352 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 TREX1Q9NSU2 369 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 PTTG3PQ9NZH4 202 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 UTS2RQ9UKP6 389 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 UBE2Q2LH0YL09 131 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 VNN2O95498 520 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 METTL15P1P0C7V9 234 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TATP17735 454 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF10P21506 573 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TEAD1P28347 426 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 CD1BP29016 333 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ADORA2AP29274 412 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SCAND1P57086 179 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RRAS2P62070 204 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RPS7P62081 194 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 EN1Q05925 392 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TDGQ13569 410 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 BOP1Q14137 746 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 QPRTQ15274 297 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 CCDC157Q569K6 752 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 DNLZQ5SXM8 178 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SCN4BQ8IWT1 228 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TUSC5Q8IXB3 177 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RHOT1Q8IXI2 618 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RDH13Q8NBN7 331 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 BHLHE23Q8NDY6 225 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 NPRL2Q8WTW4 380 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ZDHHC1Q8WTX9 485 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF382Q96SR6 550 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 INPP5KQ9BT40 448 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RBCK1Q9BYM8 510 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TASP1Q9H6P5 420 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SRA1Q9HD15 236 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 JPH1Q9HDC5 661 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM140Q9NV12 185 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 FAM118AQ9NWS6 357 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 C5AR2Q9P296 337 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 DKKL1Q9UK85 242 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 A0A075B6Q4 140 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 A0A1W2PPM1 405 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SERPINE3A8MV23 424 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF99A8MXY4 864 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 NR5A2O00482 541 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 SLC28A2O43868 658 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 BANF1O75531 89 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 RHBDL1O75783 438 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 S1PR4O95977 384 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 NR3C1P04150 777 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 OR8U8P0C7N1 319 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 CHRNB2P17787 502 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 AKT1P31749 480 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ETV6P41212 452 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 EVX1P49640 407 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM33P57088 247 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 LSM6P62312 80 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 GBX1Q14549 363 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 GUCA2BQ16661 112 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 PTCHD3Q3KNS1 767 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 PIGGQ5H8A4 983 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 EOGTQ5NDL2 527 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ATXN7L2Q5T6C5 722 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 PIP5KL1Q5T9C9 394 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 LEMD1Q68G75 181 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 MPZL3Q6UWV2 235 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 PDZD3Q86UT5 571 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ZBTB8OSQ8IWT0 167 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM104Q8NE00 496 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 OR10H4Q8NGA5 316 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 OR2T4Q8NH00 348 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 MR1Q95460 341 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 OTULINQ96BN8 352 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TSPAN17Q96FV3 270 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 PARK7Q99497 189 aaKnown RBP7.38□□□□□ -1.23
GPNMB-201ENST00000258733 VPS25Q9BRG1 176 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 EXO5Q9H790 373 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 PTGES2Q9H7Z7 377 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 METTL7AQ9H8H3 244 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 NANSQ9NR45 359 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 ERVK13-1Q9NX77 482 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 CACNA2D2Q9NY47 1150 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 TRAPPC4Q9Y296 219 aa7.38□□□□□ -1.23
GPNMB-201ENST00000258733 DDX60Q8IY21 1712 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms