RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CASZ1Q86V15 1759 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TRBV23OR9-2A0A075B6M9 112 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 A0A1W2PRB8 838 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ABCD4O14678 606 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 NFYAP23511 347 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 CD82P27701 267 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TTPAP49638 278 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 NBPF12Q5TAG4 269 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 TUSC5Q8IXB3 177 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM26EQ8N5C1 309 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 CPSF7Q8N684 471 aaKnown RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 IFI44Q8TCB0 444 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 NKD2Q969F2 451 aaPredicted RBP6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 ALG2Q9H553 416 aa6.48□□□□□ -1.37
PDGFRA-201ENST00000257290 WTIPA6NIX2 430 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 KCNU1A8MYU2 1149 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 NDUFA2O43678 99 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 GOSR1O95249 250 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ARP10275 920 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 S100A7P31151 101 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 IQCJQ1A5X6 159 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 AAK1Q2M2I8 961 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 UQCC3Q6UW78 93 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 SPNS3Q6ZMD2 512 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ARMCX2Q7L311 632 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CUZD1Q86UP6 607 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 UNC5BQ8IZJ1 945 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CMASQ8NFW8 434 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 OR5L1Q8NGL2 311 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CHAC2Q8WUX2 184 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ZUFSPQ96AP4 578 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 RASD2Q96D21 266 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ZFP3Q96NJ6 502 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 INTS14Q96SY0 518 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CACNG6Q9BXT2 260 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 SDCBP2Q9H190 292 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 SAE1Q9UBE0 346 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ZMYM5Q9UJ78 669 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM59LQ9UK28 342 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 IGSF9BQ9UPX0 1349 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 SDR42E2A6NKP2 422 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CXCL11O14625 94 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 GPR171O14626 319 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 POU2F2P09086 479 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CSH1P0DML2 217 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CSH2P0DML3 217 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 EPCAMP16422 314 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 GLRA2P23416 452 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 MAP2K4P45985 399 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 TAF6P49848 677 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 BDH1Q02338 343 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 PTSQ03393 145 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 PCGF3Q3KNV8 242 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 COL5A1-AS1Q5SY13 56 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 LRRC38Q5VT99 294 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 MEDAGQ5VYS4 303 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF367Q7RTV3 350 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 GLT6D1Q7Z4J2 308 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CATSPERDQ86XM0 798 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 WDR48Q8TAF3 677 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 SFXN2Q96NB2 322 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 P2RY13Q9BPV8 354 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 MAPKAP1Q9BPZ7 522 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM83CQ9BQN1 747 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ACTR8Q9H981 624 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 LRRC4Q9HBW1 653 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 AGO4Q9HCK5 861 aaKnown RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 PRDM7Q9NQW5 492 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 NANSQ9NR45 359 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CYP8B1Q9UNU6 501 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 TCAF1Q9Y4C2 921 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 SMLR1H3BR10 107 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 FGBP02675 491 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ALPIP09923 528 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 SUPT20HL2P0C7V6 817 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CD8BP10966 210 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 COMPP49747 757 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF157P51786 506 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 AMZ1Q400G9 498 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM119Q4V9L6 283 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ACTBL2Q562R1 376 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 FBXO47Q5MNV8 452 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM108Q6UXF1 575 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 NUP54Q7Z3B4 507 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ABI1Q8IZP0 508 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 HORMAD2Q8N7B1 307 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 CPEB3Q8NE35 698 aaKnown RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 OR56A4Q8NGH8 313 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 DYNC2LI1Q8TCX1 351 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ULK4Q96C45 1275 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 MYOCQ99972 504 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 WRAP53Q9BUR4 548 aaKnown RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ALG8Q9BVK2 526 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 RIMS4Q9H426 269 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ZDHHC6Q9H6R6 413 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 MED17Q9NVC6 651 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 RBFOX1Q9NWB1 397 aaKnown RBP6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF639Q9UID6 485 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 A0A0G2JMP0 313 aa6.47□□□□□ -1.37
PDGFRA-201ENST00000257290 MT-ND2P03891 347 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms