RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 MPP7Q5T2T1 576 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 SMARCD3Q6STE5 483 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 RD3Q7Z3Z2 195 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 FERD3LQ96RJ6 166 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 RC3H2Q9HBD1 1191 aaKnown RBP12.82□□□□□ -0.36
VHL-201ENST00000256474 PLSCR3Q9NRY6 295 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 A0A1W2PS29 197 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 CASKO14936 926 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 NPC1O15118 1278 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 PRKYO43930 277 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 SLITRK5O94991 958 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 OLFM2O95897 454 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 ARAFP10398 606 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 SDC2P34741 201 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 FCHO2Q0JRZ9 810 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 KCNC3Q14003 757 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 IRF3Q14653 427 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 FBXO43Q4G163 708 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 FAM71E1Q6IPT2 247 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 TCTN3Q6NUS6 607 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 CCDC149Q6ZUS6 474 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 ZNF367Q7RTV3 350 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 DGLUCYQ7Z3D6 616 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 GPR32P1Q8NGA4 272 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 OR4C15Q8NGM1 316 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 ZNF296Q8WUU4 475 aaPredicted RBP12.82□□□□□ -0.36
VHL-201ENST00000256474 NXPE3Q969Y0 559 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 ZNF486Q96H40 463 aaPredicted RBP12.82□□□□□ -0.36
VHL-201ENST00000256474 OPALINQ96PE5 141 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 MAPKAP1Q9BPZ7 522 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 CHST8Q9H2A9 424 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 OR51I1Q9H343 314 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 AHSPQ9NZD4 102 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 SLC23A2Q9UGH3 650 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 CEP290O15078 2479 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 A0A1W2PQL4 384 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 EIF3FO00303 357 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 HYAL3O43820 417 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 HOXB6P17509 224 aaKnown RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 SLAMF1Q13291 335 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 VOPP1Q96AW1 172 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 TMEM80Q96HE8 168 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 HHATLQ9HCP6 504 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 PAQR5Q9NXK6 330 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 NTNG1Q9Y2I2 539 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 MRPS23Q9Y3D9 190 aaKnown RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 COL4A4P53420 1690 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 CENPXA8MT69 81 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 EPHX1P07099 455 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 HSD3B1P14060 373 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 PTX3P26022 381 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 HSD3B2P26439 372 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 MAT2AP31153 395 aaKnown RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 CSTF2P33240 577 aaKnown RBP eCLIP12.81□□□□□ -0.36
VHL-201ENST00000256474 RORCP51449 518 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 GPR19Q15760 415 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 C9orf64Q5T6V5 341 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 PODNL1Q6PEZ8 512 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 RAB43Q86YS6 212 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 OR4K5Q8NGD3 323 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 CRELD1Q96HD1 420 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 MAGEB10Q96LZ2 347 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 TREX2Q9BQ50 279 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 BCL7BQ9BQE9 202 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 CXXC1Q9P0U4 656 aaPredicted RBP12.81□□□□□ -0.36
VHL-201ENST00000256474 PCDHGA3Q9Y5H0 932 aa12.81□□□□□ -0.36
VHL-201ENST00000256474 PI15O43692 258 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 NCF4Q15080 339 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 ACSM5Q6NUN0 579 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 PAMR1Q6UXH9 720 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 FAM129CQ86XR2 697 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 ENKURQ8TC29 256 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 POP5Q969H6 163 aaKnown RBP12.8□□□□□ -0.36
VHL-201ENST00000256474 RAD51AP1Q96B01 352 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 BARHL1Q9BZE3 327 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 ZCCHC2Q9C0B9 1178 aaKnown RBP12.8□□□□□ -0.36
VHL-201ENST00000256474 IRAK3Q9Y616 596 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 OSMP13725 252 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
VHL-201ENST00000256474 EPCAMP16422 314 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 CBLP22681 906 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 UQCRC2P22695 453 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 ELAVL4P26378 380 aaKnown RBP12.8□□□□□ -0.36
VHL-201ENST00000256474 PPP2R1BP30154 601 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 TAS2R41P59536 307 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 PCM1Q15154 2024 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 SLC9B2Q86UD5 537 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 AMZ2Q86W34 360 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 KRT73Q86Y46 540 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 OR8K5Q8NH50 307 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 C16orf58Q96GQ5 468 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 FYTTD1Q96QD9 318 aaKnown RBP12.8□□□□□ -0.36
VHL-201ENST00000256474 ZNF607Q96SK3 696 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 RHBGQ9H310 441 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 SP140LQ9H930 580 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 FBXL12Q9NXK8 326 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 KLHL42Q9P2K6 505 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 ATP6V1HQ9UI12 483 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms