RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 CXorf21Q9HAI6 301 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 GIMAP4Q9NUV9 329 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 ENTPD4Q9Y227 616 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 POLHQ9Y253 713 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 PTPRQQ9UMZ3 2332 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 CDC14CA4D256 554 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 PEX12O00623 359 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 SLC22A2O15244 555 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 PDPK1O15530 556 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 SCN2BO60939 215 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 ERAL1O75616 437 aaKnown RBP13.18□□□□□ -0.3
VPS25-201ENST00000253794 LAMP1P11279 417 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 COX7A2P14406 83 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 ITPKBP27987 946 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 IL12AP29459 219 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 ADSLP30566 484 aaPredicted RBP13.18□□□□□ -0.3
VPS25-201ENST00000253794 NTSP30990 170 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 MPIP34949 423 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 SOX18P35713 384 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 SOX8P57073 446 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 STX1BP61266 288 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 ID2Q02363 134 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 DUSP2Q05923 314 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 VAC14Q08AM6 782 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 MGAT2Q10469 447 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 MAP4K2Q12851 820 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 RCAN2Q14206 197 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 RPS6KA2Q15349 733 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 EXT1Q16394 746 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 PLAG1Q6DJT9 500 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 FAAH2Q6GMR7 532 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 PAPD4Q6PIY7 484 aaKnown RBP13.18□□□□□ -0.3
VPS25-201ENST00000253794 MSANTD1Q6ZTZ1 278 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 ANKS4BQ8N8V4 417 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 TMEM102Q8N9M5 508 aaPredicted RBP13.18□□□□□ -0.3
VPS25-201ENST00000253794 MORN4Q8NDC4 146 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 OR7A2PQ8NGA2 310 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 PSMA8Q8TAA3 256 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 DAZLQ92904 295 aaKnown RBP13.18□□□□□ -0.3
VPS25-201ENST00000253794 C8orf44Q96CB5 159 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 ZBED6CLQ96FA7 236 aaPredicted RBP13.18□□□□□ -0.3
VPS25-201ENST00000253794 FBXL20Q96IG2 436 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 AMDHD1Q96NU7 426 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 DGAT2Q96PD7 388 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 SLAMF7Q9NQ25 335 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 SH3BP4Q9P0V3 963 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 ZNF639Q9UID6 485 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 FBXL4Q9UKA2 621 aa13.18□□□□□ -0.3
VPS25-201ENST00000253794 DYTNA2CJ06 578 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 FAM234BA2RU67 622 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 PLOD2O00469 737 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 RNASET2O00584 256 aaKnown RBP13.17□□□□□ -0.3
VPS25-201ENST00000253794 DDAH2O95865 285 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 IGKV3-11P04433 115 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 IL6P05231 212 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 ICAM2P13598 275 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 FEN1P39748 380 aaKnown RBP13.17□□□□□ -0.3
VPS25-201ENST00000253794 KIR3DL1P43629 444 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 WNT3P56703 355 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 SLC26A5P58743 744 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 EEF1A2Q05639 463 aaKnown RBP13.17□□□□□ -0.3
VPS25-201ENST00000253794 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 PRICKLE4Q2TBC4 344 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 ZNF750Q32MQ0 723 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 ZNF628Q5EBL2 1059 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 DCAF10Q5QP82 559 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 ANKRD26P1Q6NSI1 321 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 BLOC1S3Q6QNY0 202 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 DGAT2L6Q6ZPD8 337 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 FUNDC1Q8IVP5 155 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
VPS25-201ENST00000253794 GALNT12Q8IXK2 581 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 B3GNT7Q8NFL0 401 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 M1APQ8TC57 530 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 TSPEARQ8WU66 669 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 ART5Q96L15 291 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 FER1L6-AS2Q96M78 137 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 BBS4Q96RK4 519 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 ZBTB18Q99592 522 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 DUSP26Q9BV47 211 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 SEMA4CQ9C0C4 833 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 FAM107BQ9H098 131 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 GLIPR2Q9H4G4 154 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 SLC52A3Q9NQ40 469 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 SAR1AQ9NR31 198 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 PNO1Q9NRX1 252 aaKnown RBP13.17□□□□□ -0.3
VPS25-201ENST00000253794 FAM120CQ9NX05 1096 aaKnown RBP13.17□□□□□ -0.3
VPS25-201ENST00000253794 MAT2BQ9NZL9 334 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 CLCA3PQ9Y6N3 262 aa13.17□□□□□ -0.3
VPS25-201ENST00000253794 LOC400499M0QZD8 3231 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 A0A087WV62 115 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 NSG1A0A0A6YYJ2 146 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 IGHV3-20A0A0C4DH32 117 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 OR10H2O60403 315 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 PLOD3O60568 738 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 IFNA16P05015 189 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 PGRP06401 933 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms