RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 OR5M11Q96RB7 305 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 IL4I1Q96RQ9 567 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 UCK2Q9BZX2 261 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 PHPT1Q9NRX4 125 aaPredicted RBP18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 TMCC3Q9ULS5 477 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 SH3D21A4FU49 640 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 SCAMP1O15126 338 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 RPLP0P05388 317 aaKnown RBP18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 CEACAM5P06731 702 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 H1F0P07305 194 aaKnown RBP18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 HSMCR30P0CW71 290 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 OSMP13725 252 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 C5AR1P21730 350 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 PKLRP30613 574 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 RGS6P49758 472 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 LIMK1P53667 647 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 TRA2BP62995 288 aaKnown RBP18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 TUBA1BP68363 451 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 FBXO43Q4G163 708 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 TUBA1AQ71U36 451 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 WDR53Q7Z5U6 358 aaPredicted RBP18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 C7orf61Q8IZ16 206 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 FAM46DQ8NEK8 389 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 SLC35G5Q96KT7 338 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZNF607Q96SK3 696 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 BTBD1Q9H0C5 482 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 KCNK12Q9HB15 430 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 SLC6A20Q9NP91 592 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 SLC35C2Q9NQQ7 365 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 SEMA3GQ9NS98 782 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 P2RX2Q9UBL9 471 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 ACAD8Q9UKU7 415 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 GPC6Q9Y625 555 aaPredicted RBP18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 LOC100506127A0A0U1RQW1 187 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 METTL15A6NJ78 407 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR10H3O60404 316 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 DRD2P14416 443 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 GPC1P35052 558 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 GPR19Q15760 415 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZIC1Q15915 447 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 HMGN2P46Q86SG4 172 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR52E1Q8NGJ3 308 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR2L8Q8NGY9 312 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 SLC7A13Q8TCU3 470 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 FUZQ9BT04 418 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 TMEM106CQ9BVX2 250 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 CDCA4Q9BXL8 241 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 SYNPO2LQ9H987 977 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZCCHC3Q9NUD5 404 aaKnown RBP18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 CLN6Q9NWW5 311 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 IFT52Q9Y366 437 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 PCDHGA3Q9Y5H0 932 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 M0R3H8 397 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 MAN2B1O00754 1011 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 DSCR3O14972 297 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZW10O43264 779 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 MPZL2O60487 215 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ADH1BP00325 375 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ALPPL2P10696 532 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 TEAD1P28347 426 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 SLC15A1P46059 708 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 NCBP2P52298 156 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 RELAQ04206 551 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ILKQ13418 452 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 PIN1Q13526 163 aaPredicted RBP18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZNF750Q32MQ0 723 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZNF404Q494X3 552 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 PGBD2Q6P3X8 592 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 UBE2Q1Q7Z7E8 422 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZNF513Q8N8E2 541 aaPredicted RBP18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR8K5Q8NH50 307 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 CRELD1Q96HD1 420 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 KXD1Q9BQD3 176 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 TIMM29Q9BSF4 260 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 CENPOQ9BU64 300 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 ROGDIQ9GZN7 287 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 MVB12BQ9H7P6 319 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 IRAK4Q9NWZ3 460 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 CNOT2Q9NZN8 540 aaKnown RBP18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 TRPC4Q9UBN4 977 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 A4GNTQ9UNA3 340 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 MGAT4BQ9UQ53 548 aa18.47■□□□□ 0.55
CDC42EP1-201ENST00000249014 EFCAB10A6NFE3 127 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 PRR19A6NJB7 356 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 TLR4O00206 839 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 FAAHO00519 579 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 HAT1O14929 419 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 PGRMC2O15173 223 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 ENTPD6O75354 484 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 APODP05090 189 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 DBTP11182 482 aaKnown RBP18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 DUSP2Q05923 314 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 SLAMF1Q13291 335 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 USP43Q70EL4 1123 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 FBXL6Q8N531 539 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 TBC1D19Q8N5T2 526 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 MS4A6EQ96DS6 147 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 NEURL2Q9BR09 285 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 YIPF4Q9BSR8 244 aa18.46■□□□□ 0.55
CDC42EP1-201ENST00000249014 SLC25A19Q9HC21 320 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms