RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 NADK2Q4G0N4 442 aa22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 CYP27C1Q4G0S4 372 aa22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 RPS26P11Q5JNZ5 115 aaPredicted RBP22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 OGFOD3Q6PK18 319 aa22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 GATAD2AQ86YP4 633 aa22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 SPPL2AQ8TCT8 520 aa22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 KLHL6Q8WZ60 621 aa22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 IL21RQ9HBE5 538 aa22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 SAMHD1Q9Y3Z3 626 aaKnown RBP22.02■■□□□ 1.12
SYNGR3-201ENST00000248121 MITFO75030 526 aaPredicted RBP22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 TFPTP0C1Z6 253 aa22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 ALPPL2P10696 532 aa22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 POLR2IP36954 125 aaKnown RBP22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 OR1E2P47887 323 aa22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 DAPP51397 102 aa22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 TP53BP2Q13625 1128 aa22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 LPAL2Q16609 132 aa22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 REEP3Q6NUK4 255 aa22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 ENTPD2Q9Y5L3 495 aa22.02■■□□□ 1.11
SYNGR3-201ENST00000248121 PRAMEF27A3QJZ7 478 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 RECKO95980 971 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 BCHEP06276 602 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 SLC35G6P0C7Q6 338 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 C8orf89P0DMQ9 161 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 ST6GAL1P15907 406 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 NTSP30990 170 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 C14orf28Q4W4Y0 310 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 IFI44LQ53G44 452 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 RBM12BQ8IXT5 1001 aaKnown RBP22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 SMYD1Q8NB12 490 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 OR2I1PQ8NGU4 316 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 BAHD1Q8TBE0 780 aaPredicted RBP22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 BBS4Q96RK4 519 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 ERVMER34-1Q9H9K5 563 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 ANKMY1Q9P2S6 941 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 POMT2Q9UKY4 750 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 RAB23Q9ULC3 237 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 RNF215Q9Y6U7 377 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 RP1P56715 2156 aa22.01■■□□□ 1.11
SYNGR3-201ENST00000248121 A0A0J9YY10 115 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 DNAJB6O75190 326 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 CTSBP07858 339 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 GNSP15586 552 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 TGM3Q08188 693 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 EPS8Q12929 822 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 GPR19Q15760 415 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 NKAIN2Q5VXU1 208 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 SLC35F3Q8IY50 421 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 CCDC116Q8IYX3 515 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 ZFP28Q8NHY6 868 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 ZCCHC10Q8TBK6 192 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 TMEM19Q96HH6 336 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 MYCBPQ99417 103 aaPredicted RBP22■■□□□ 1.11
SYNGR3-201ENST00000248121 SLC38A3Q99624 504 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 YIPF3Q9GZM5 350 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 EPB41L1Q9H4G0 881 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 REEP1Q9H902 201 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 FAM60AQ9NP50 221 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 THUMPD1Q9NXG2 353 aaKnown RBP22■■□□□ 1.11
SYNGR3-201ENST00000248121 PDP1Q9P0J1 537 aaPredicted RBP22■■□□□ 1.11
SYNGR3-201ENST00000248121 C3orf18Q9UK00 162 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 NINQ8N4C6 2090 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 GPC1P35052 558 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 FEN1P39748 380 aaKnown RBP22■■□□□ 1.11
SYNGR3-201ENST00000248121 CEBPEQ15744 281 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 C6orf132Q5T0Z8 1188 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 TTC23Q5W5X9 447 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 KDM4DQ6B0I6 523 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 SLC30A8Q8IWU4 369 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 NRBF2Q96F24 287 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 C10orf90Q96M02 699 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 ZNF681Q96N22 645 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 ZFYVE21Q9BQ24 234 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 LYARQ9NX58 379 aaKnown RBP22■■□□□ 1.11
SYNGR3-201ENST00000248121 KCMF1Q9P0J7 381 aa22■■□□□ 1.11
SYNGR3-201ENST00000248121 MRPS2Q9Y399 296 aaKnown RBP22■■□□□ 1.11
SYNGR3-201ENST00000248121 KIF1CO43896 1103 aaKnown RBP21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 IGFBP5P24593 272 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 RRM2P31350 389 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 CAPZBP47756 277 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 NR1H2P55055 460 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 GFERP55789 205 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 DUSP7Q16829 419 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 DEFB110Q30KQ9 67 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 SLC44A2Q8IWA5 706 aaPredicted RBP21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 SHISA5Q8N114 240 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 OR5D16Q8NGK9 328 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 ZCCHC3Q9NUD5 404 aaKnown RBP21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 KMT2EQ8IZD2 1858 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 TRIM64CA6NLI5 447 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 H0YGG7 62 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 ELK4P28324 431 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 ARF3P61204 181 aaPredicted RBP21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 RELAQ04206 551 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 DEFB134Q4QY38 66 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 ZC3H12BQ5HYM0 836 aaKnown RBP21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 FAM92BQ6ZTR7 304 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 GALNT5Q7Z7M9 940 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 LZICQ8WZA0 190 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 EPYCQ99645 322 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms