RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 MT-ND2P03891 347 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 FHP07954 510 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 CSNK2A2P19784 350 aaPredicted RBP14.3□□□□□ -0.12
DDX49-201ENST00000247003 KCNJ5P48544 419 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 YPEL5P62699 121 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 KIR2DS3Q14952 304 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 SLC48A1Q6P1K1 146 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 DEF8Q6ZN54 512 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 ASPGQ86U10 573 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 PAQR7Q86WK9 346 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 CCDC71Q8IV32 467 aaPredicted RBP14.3□□□□□ -0.12
DDX49-201ENST00000247003 OR5D16Q8NGK9 328 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 VANGL1Q8TAA9 524 aaPredicted RBP14.3□□□□□ -0.12
DDX49-201ENST00000247003 FCGR1BQ92637 280 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 GTPBP3Q969Y2 492 aaKnown RBP14.3□□□□□ -0.12
DDX49-201ENST00000247003 TREX2Q9BQ50 279 aaPredicted RBP14.3□□□□□ -0.12
DDX49-201ENST00000247003 ROGDIQ9GZN7 287 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 C3orf14Q9HBI5 128 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 PLGRKTQ9HBL7 147 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 RHCGQ9UBD6 479 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 KLHL20Q9Y2M5 609 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 ATG4BQ9Y4P1 393 aa14.3□□□□□ -0.12
DDX49-201ENST00000247003 HEMK1Q9Y5R4 338 aaPredicted RBP14.3□□□□□ -0.12
DDX49-201ENST00000247003 A0A1W2PR48 441 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 URADA6NGE7 173 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 C4orf51C9J302 202 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 MPZL2O60487 215 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 B4GALT2O60909 372 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 WBP4O75554 376 aaKnown RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 UGT2B17O75795 530 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 VIPP01282 170 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 F3P13726 295 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 ZNF182P17025 639 aaPredicted RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 BUD31P41223 144 aaPredicted RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 TPMTP51580 245 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 FBXO43Q4G163 708 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 PRRT3Q5FWE3 981 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 DCST1Q5T197 706 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 NRROSQ86YC3 692 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 APH1BQ8WW43 257 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 DNASE1L2Q92874 299 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 UCN3Q969E3 161 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 COPS4Q9BT78 406 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 TMEM168Q9H0V1 697 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 NMNAT1Q9HAN9 279 aaPredicted RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 APOBEC3BQ9UH17 382 aaKnown RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 SLC9A8Q9Y2E8 581 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 COL4A2P08572 1712 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 EML2O95834 649 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 ADAP00813 363 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 H1F0P07305 194 aaKnown RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 NR2F6P10588 404 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 POU2F1P14859 743 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 CBLP22681 906 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 CTSKP43235 329 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 MAP2K4P45985 399 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 STT3AP46977 705 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 LIM2P55344 173 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 SRP54P61011 504 aaKnown RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 BTN3A2P78410 334 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 ILF3Q12906 894 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX49-201ENST00000247003 FOXD4Q12950 439 aaPredicted RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 PUM1Q14671 1186 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX49-201ENST00000247003 SYPL1Q16563 259 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 LAIR1Q6GTX8 287 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 Q6ZPB1 254 aaPredicted RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 CCDC116Q8IYX3 515 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 SMRP1Q8NCR6 262 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 GPR32P1Q8NGA4 272 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 SUN3Q8TAQ9 357 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 APOBEC4Q8WW27 367 aaKnown RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 BMFQ96LC9 184 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 BTBD2Q9BX70 525 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 SERHL2Q9H4I8 314 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 ACOT13Q9NPJ3 140 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 CD93Q9NPY3 652 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 PLCXD1Q9NUJ7 323 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 TRNAU1APQ9NX07 287 aaKnown RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 KLF15Q9UIH9 416 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 CD207Q9UJ71 328 aa14.29□□□□□ -0.12
DDX49-201ENST00000247003 GPC6Q9Y625 555 aaPredicted RBP14.29□□□□□ -0.12
DDX49-201ENST00000247003 GSAPA4D1B5 854 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 TMX2-CTNND1H3BSU7 103 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 FAAHO00519 579 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 TOR1BO14657 336 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 PGRMC2O15173 223 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 SLC22A1O15245 554 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 EMC8O43402 210 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 MAN1A2O60476 641 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 ZNF10P21506 573 aaPredicted RBP14.28□□□□□ -0.12
DDX49-201ENST00000247003 FEN1P39748 380 aaKnown RBP14.28□□□□□ -0.12
DDX49-201ENST00000247003 UGT2B15P54855 530 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 DGCR6Q14129 220 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 LASP1Q14847 261 aaKnown RBP14.28□□□□□ -0.12
DDX49-201ENST00000247003 SUZ12Q15022 739 aaKnown RBP14.28□□□□□ -0.12
DDX49-201ENST00000247003 GPAT3Q53EU6 434 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 SYT6Q5T7P8 510 aaPredicted RBP14.28□□□□□ -0.12
DDX49-201ENST00000247003 C18orf63Q68DL7 685 aa14.28□□□□□ -0.12
DDX49-201ENST00000247003 TMEM107Q6UX40 140 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms