RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 CXXC1Q9P0U4 656 aaPredicted RBP20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 NINQ8N4C6 2090 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 ANKRD34BA5PLL1 514 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 ARHGAP33O14559 1287 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 OR10H3O60404 316 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 CCT3P49368 545 aaKnown RBP20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 CDK3Q00526 305 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 DOC2BQ14184 412 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 MLC1Q15049 377 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 SSX1Q16384 188 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 MEDAGQ5VYS4 303 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 DEF8Q6ZN54 512 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 UBE3DQ7Z6J8 389 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 CYP4Z2PQ8N1L4 340 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 RAB7BQ96AH8 199 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 TEFMQ96QE5 360 aaKnown RBP20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 IL4I1Q96RQ9 567 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 SNX11Q9Y5W9 270 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 C1QTNF3-AMACRE9PGA6 284 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 FGBP02675 491 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 PCCBP05166 539 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 POU2F2P09086 479 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 SOX6P35712 828 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 ETV6P41212 452 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 RHAGQ02094 409 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 CAMK1Q14012 370 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 PGBD2Q6P3X8 592 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 RBM45Q8IUH3 476 aaKnown RBP20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 VANGL1Q8TAA9 524 aaPredicted RBP20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 OPALINQ96PE5 141 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 SEMA3GQ9NS98 782 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 QPCTLQ9NXS2 382 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 CFL2Q9Y281 166 aa20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 LSM2Q9Y333 95 aaKnown RBP20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 DNMT3AQ9Y6K1 912 aaPredicted RBP20.5■□□□□ 0.87
SH2D3A-201ENST00000245908 COL4A3Q01955 1670 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 MYO7AQ13402 2215 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 SOX14O95416 240 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 SMIM11AP58511 58 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 ARPC4P59998 168 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 TP53BP2Q13625 1128 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 FAM83FQ8NEG4 500 aaPredicted RBP20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 ZNF486Q96H40 463 aaPredicted RBP20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 LGR4Q9BXB1 951 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 DDX31Q9H8H2 851 aaKnown RBP20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 TAS2R7Q9NYW3 318 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 SEC14L3Q9UDX4 400 aa20.49■□□□□ 0.87
SH2D3A-201ENST00000245908 SLC28A2O43868 658 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 SLITRK5O94991 958 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 MED26O95402 600 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 IGFBP1P08833 259 aaPredicted RBP20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 CSTF2P33240 577 aaKnown RBP eCLIP20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 FEN1P39748 380 aaKnown RBP20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 XKP51811 444 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 TRA2BP62995 288 aaKnown RBP20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 POC5Q8NA72 575 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 KLHL6Q8WZ60 621 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 TRNT1Q96Q11 434 aaKnown RBP20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 TREX2Q9BQ50 279 aaPredicted RBP20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 WFDC6Q9BQY6 131 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 P2RX2Q9UBL9 471 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 MKLN1Q9UL63 735 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 PRAMEF27A3QJZ7 478 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 OR1F1O43749 312 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 SCG5P05408 212 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 UBE3AQ05086 875 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 PIP5KL1Q5T9C9 394 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 VASH1Q7L8A9 365 aaPredicted RBP20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 LILRB4Q8NHJ6 448 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 SLC35G5Q96KT7 338 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 DNAJC27Q9NZQ0 273 aa20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 MKI67P46013 3256 aaKnown RBP20.48■□□□□ 0.87
SH2D3A-201ENST00000245908 A8MU76 341 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 HAT1O14929 419 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 GPX5O75715 221 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 PTTG1O95997 202 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 SEPHS1P49903 392 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 NCF4Q15080 339 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 SYPL1Q16563 259 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 LRIT3Q3SXY7 679 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 AMER3Q8N944 861 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 LINC01555Q8NAE3 123 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 SUSD6Q92537 303 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 TMEM80Q96HE8 168 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 RACGAP1Q9H0H5 632 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 POLR2J3Q9H1A7 115 aaKnown RBP20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 OR51I1Q9H343 314 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 HHATLQ9HCP6 504 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 A4GNTQ9UNA3 340 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 A0A0A6YYD5 115 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 SLC35G4P0C7Q5 338 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 OR12D1P0DN82 309 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 GTF2E2P29084 291 aaKnown RBP20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 CSNK1G2P78368 415 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 FAM46CQ5VWP2 391 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 OR4C11Q6IEV9 310 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 CASP12Q6UXS9 341 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 TBC1D19Q8N5T2 526 aa20.47■□□□□ 0.87
SH2D3A-201ENST00000245908 OR8J1Q8NGP2 316 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms