RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 LATO43561 262 aa20.76■□□□□ 0.91
RNF39-201ENST00000244360 PRICKLE3O43900 615 aaPredicted RBP20.76■□□□□ 0.91
RNF39-201ENST00000244360 PDE9AO76083 593 aa20.76■□□□□ 0.91
RNF39-201ENST00000244360 ADORA3P0DMS8 318 aa20.76■□□□□ 0.91
RNF39-201ENST00000244360 PRKCDQ05655 676 aa20.76■□□□□ 0.91
RNF39-201ENST00000244360 ZNF770Q6IQ21 691 aaPredicted RBP20.76■□□□□ 0.91
RNF39-201ENST00000244360 MAPKAP1Q9BPZ7 522 aa20.76■□□□□ 0.91
RNF39-201ENST00000244360 RSPO3Q9BXY4 272 aaPredicted RBP20.76■□□□□ 0.91
RNF39-201ENST00000244360 ZNF226Q9NYT6 803 aa20.76■□□□□ 0.91
RNF39-201ENST00000244360 PCDHGA3Q9Y5H0 932 aa20.76■□□□□ 0.91
RNF39-201ENST00000244360 A0A1W2PQU0 124 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 CACNB4O00305 520 aaPredicted RBP20.75■□□□□ 0.91
RNF39-201ENST00000244360 FUT4P22083 530 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 PBX2P40425 430 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 GSSP48637 474 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 IRF3Q14653 427 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 SPDYE7PQ495Y7 208 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 PARM1Q6UWI2 310 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 ZNF793Q6ZN11 406 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 ADCK2Q7Z695 626 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 HPS1Q92902 700 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 FGF14Q92915 247 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 DPH7Q9BTV6 452 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 SLC17A9Q9BYT1 436 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 CDH23Q9H251 3354 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 SERHL2Q9H4I8 314 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 FBXL12Q9NXK8 326 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 DUSP12Q9UNI6 340 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 PLEKHM1Q9Y4G2 1056 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 KLK4Q9Y5K2 254 aa20.75■□□□□ 0.91
RNF39-201ENST00000244360 SH3D21A4FU49 640 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 FFAR1O14842 300 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 BCL6P41182 706 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 SSR2P43308 183 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 SOX9P48436 509 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 CDC42P60953 191 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 KRR1Q13601 381 aaKnown RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 KIAA1211LQ6NV74 962 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 OR52E1Q8NGJ3 308 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 SCARF2Q96GP6 870 aaPredicted RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 C6orf62Q9GZU0 229 aaPredicted RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 MKRN2Q9H000 416 aaKnown RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 ZSCAN32Q9NX65 697 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 CNOT2Q9NZN8 540 aaKnown RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 MN1Q10571 1320 aaPredicted RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 EFCAB10A6NFE3 127 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 PTTG1O95997 202 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 EIF2S1P05198 315 aaKnown RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 CCT3P49368 545 aaKnown RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 LIM2P55344 173 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 ABATP80404 500 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.74■□□□□ 0.91
RNF39-201ENST00000244360 GANABQ14697 944 aaKnown RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 UAP1L1Q3KQV9 507 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 TIMM50Q3ZCQ8 353 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 TPRG1LQ5T0D9 272 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 ANKRD54Q6NXT1 300 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 UCN3Q969E3 161 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 DHRS1Q96LJ7 313 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 C17orf62Q9BQA9 187 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 SLC6A20Q9NP91 592 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 ABCB10Q9NRK6 738 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 GPR83Q9NYM4 423 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 PEX16Q9Y5Y5 336 aa20.74■□□□□ 0.91
RNF39-201ENST00000244360 GPC6Q9Y625 555 aaPredicted RBP20.74■□□□□ 0.91
RNF39-201ENST00000244360 PPM1DO15297 605 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 STSP08842 583 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 TIE1P35590 1138 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 HYAL2Q12891 473 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 COLEC12Q5KU26 742 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 NDUFAF5Q5TEU4 345 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 UTP15Q8TED0 518 aaKnown RBP20.73■□□□□ 0.91
RNF39-201ENST00000244360 RAB8BQ92930 207 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 EFHD2Q96C19 240 aaPredicted RBP20.73■□□□□ 0.91
RNF39-201ENST00000244360 AMDHD1Q96NU7 426 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 SARGQ9BW04 601 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 PBX4Q9BYU1 374 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 FTSJ1Q9UET6 329 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 EPOPA6NHQ4 379 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 LINC01565O15544 149 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 RNGTTO60942 597 aaKnown RBP20.73■□□□□ 0.91
RNF39-201ENST00000244360 DBTP11182 482 aaKnown RBP20.73■□□□□ 0.91
RNF39-201ENST00000244360 RGS6P49758 472 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 ARFIP1P53367 373 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 SEC13P55735 322 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 CD300CQ08708 224 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 ST3GAL4Q11206 333 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 ARMCX4Q5H9R4 360 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 AQP11Q8NBQ7 271 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 RPP25Q9BUL9 199 aaKnown RBP20.73■□□□□ 0.91
RNF39-201ENST00000244360 TRMT61BQ9BVS5 477 aaKnown RBP20.73■□□□□ 0.91
RNF39-201ENST00000244360 C1QTNF7Q9BXJ2 289 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 CDCA4Q9BXL8 241 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 GLIPR2Q9H4G4 154 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 NMNAT1Q9HAN9 279 aaPredicted RBP20.73■□□□□ 0.91
RNF39-201ENST00000244360 MRPS30Q9NP92 439 aaKnown RBP20.73■□□□□ 0.91
RNF39-201ENST00000244360 PCDHGA4Q9Y5G9 962 aa20.73■□□□□ 0.91
RNF39-201ENST00000244360 A0A0G2JN53 185 aa20.72■□□□□ 0.91
RNF39-201ENST00000244360 OR52A4PA6NMU1 304 aa20.72■□□□□ 0.91
RNF39-201ENST00000244360 MED26O95402 600 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms