RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 CAMK1GQ96NX5 476 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 KCNC2Q96PR1 638 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 RAB11FIP5Q9BXF6 653 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 RASSF1Q9NS23 344 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 SIRT3Q9NTG7 399 aaPredicted RBP12.03□□□□□ -0.48
SNAI1-201ENST00000244050 TBC1D23Q9NUY8 699 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 RLIMQ9NVW2 624 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 ENOPH1Q9UHY7 261 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 KCND3Q9UK17 655 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 MRPS17Q9Y2R5 130 aaKnown RBP12.03□□□□□ -0.48
SNAI1-201ENST00000244050 SNX8Q9Y5X2 465 aa12.03□□□□□ -0.48
SNAI1-201ENST00000244050 A0A0A6YYD5 115 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 CHURC1-FNTBB4DL54 471 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 OR1F1O43749 312 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 TMPRSS11DO60235 418 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 APBB3O95704 486 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 RECKO95980 971 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 TFPTP0C1Z6 253 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 DRD2P14416 443 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 RAB28P51157 221 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 RAB15P59190 212 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 UBE2UQ5VVX9 321 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 OR4C11Q6IEV9 310 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 Q6ZNX1 250 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 RD3Q7Z3Z2 195 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 P3H2Q8IVL5 708 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 DEPDC4Q8N2C3 294 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 TSTD1Q8NFU3 115 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 OR2A1Q8NGT9 310 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 OR2L8Q8NGY9 312 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 OR52J3Q8NH60 311 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 SLC38A5Q8WUX1 472 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 APOBEC4Q8WW27 367 aaKnown RBP12.02□□□□□ -0.49
SNAI1-201ENST00000244050 OR1E3Q8WZA6 343 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 FCGR1BQ92637 280 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 TOE1Q96GM8 510 aaKnown RBP12.02□□□□□ -0.49
SNAI1-201ENST00000244050 ABCG4Q9H172 646 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 C6orf106Q9H6K1 298 aaPredicted RBP12.02□□□□□ -0.49
SNAI1-201ENST00000244050 FKBP14Q9NWM8 211 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 PSORS1C1Q9UIG5 152 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 SH3GLB1Q9Y371 365 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 ZNF451Q9Y4E5 1061 aa12.02□□□□□ -0.49
SNAI1-201ENST00000244050 OR2A25A4D2G3 310 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 C5orf58C9J3I9 102 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 J3KTA2 159 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 LCMT2O60294 686 aaKnown RBP12.01□□□□□ -0.49
SNAI1-201ENST00000244050 PDE9AO76083 593 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 CCNB2O95067 398 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 MFN2O95140 757 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 GADD45GO95257 159 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 VIPP01282 170 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 IGLV3-19P01714 112 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 IFNW1P05000 195 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 GABRB1P18505 474 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 CBLP22681 906 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 PKLRP30613 574 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 ALDH9A1P49189 494 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 ARFIP1P53367 373 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 C21orf59P57076 290 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 YPEL5P62699 121 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 TCEA2Q15560 299 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 ZIC1Q15915 447 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 DUSP7Q16829 419 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 UAP1L1Q3KQV9 507 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 TMEM35AQ53FP2 167 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 KIAA0895LQ68EN5 471 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 C6orf120Q7Z4R8 191 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 ZNF687Q8N1G0 1237 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 SMYD1Q8NB12 490 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 SUMF1Q8NBK3 374 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 MYDGFQ969H8 173 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 TSACCQ96A04 125 aaPredicted RBP12.01□□□□□ -0.49
SNAI1-201ENST00000244050 HSPBAP1Q96EW2 488 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 PLEKHA8Q96JA3 519 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 NIPSNAP1Q9BPW8 284 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 MVB12BQ9H7P6 319 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 ZNF556Q9HAH1 456 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 PRDM8Q9NQV8 689 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 EHD3Q9NZN3 535 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 CEP250Q9BV73 2442 aa12.01□□□□□ -0.49
SNAI1-201ENST00000244050 IGKV1-8A0A0C4DH67 115 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 MED19A0JLT2 244 aaPredicted RBP12□□□□□ -0.49
SNAI1-201ENST00000244050 LRIT2A6NDA9 550 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 OR52A4PA6NMU1 304 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 CLCA1A8K7I4 914 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 PRAMEF26H0Y7S4 382 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 PCDH17O14917 1159 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 B4GALT2O60909 372 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 FADS2O95864 444 aaKnown RBP12□□□□□ -0.49
SNAI1-201ENST00000244050 IGHV4-34P06331 123 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 MAGEA8P43361 318 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 MLLT10P55197 1068 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 ABATP80404 500 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 PUM1Q14671 1186 aaKnown RBP eCLIP12□□□□□ -0.49
SNAI1-201ENST00000244050 TPRG1LQ5T0D9 272 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 FAM180BQ6P0A1 224 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 Q6ZPB1 254 aaPredicted RBP12□□□□□ -0.49
SNAI1-201ENST00000244050 AHSA2Q719I0 299 aa12□□□□□ -0.49
SNAI1-201ENST00000244050 P2RY8Q86VZ1 359 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms