RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ENTPD4Q9Y227 616 aa18.85■□□□□ 0.61
SNRPA-201ENST00000243563 ZNF780BQ9Y6R6 833 aa18.85■□□□□ 0.61
SNRPA-201ENST00000243563 CEP295Q9C0D2 2601 aa18.85■□□□□ 0.61
SNRPA-201ENST00000243563 C21orf140B9A014 251 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 MASP2O00187 686 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 CBX6O95503 412 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 CAPNS1P04632 268 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 PORP16435 677 aaPredicted RBP18.84■□□□□ 0.61
SNRPA-201ENST00000243563 CSNK2A2P19784 350 aaPredicted RBP18.84■□□□□ 0.61
SNRPA-201ENST00000243563 CPA2P48052 419 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 HBA1P69905 142 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 MGAT2Q10469 447 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 GTDC1Q4AE62 458 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 FAM111BQ6SJ93 734 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 C6orf89Q6UWU4 347 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 DNAJC14Q6Y2X3 702 aaPredicted RBP18.84■□□□□ 0.61
SNRPA-201ENST00000243563 PPP1R32Q7Z5V6 425 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 LRRC25Q8N386 305 aaPredicted RBP18.84■□□□□ 0.61
SNRPA-201ENST00000243563 NPAS2Q99743 824 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 WDR77Q9BQA1 342 aaPredicted RBP18.84■□□□□ 0.61
SNRPA-201ENST00000243563 PNO1Q9NRX1 252 aaKnown RBP18.84■□□□□ 0.61
SNRPA-201ENST00000243563 SIRT3Q9NTG7 399 aaPredicted RBP18.84■□□□□ 0.61
SNRPA-201ENST00000243563 ATAD3AQ9NVI7 634 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 FAM120CQ9NX05 1096 aaKnown RBP18.84■□□□□ 0.61
SNRPA-201ENST00000243563 PSME2Q9UL46 239 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 PCDHGA6Q9Y5G7 932 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 HS3ST3B1Q9Y662 390 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 NCOR2Q9Y618 2525 aa18.84■□□□□ 0.61
SNRPA-201ENST00000243563 A0A1W2PP18 115 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 A0A1W2PRB8 838 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 NME6O75414 186 aaPredicted RBP18.83■□□□□ 0.61
SNRPA-201ENST00000243563 UBOX5O94941 541 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 SLC35E2P0CK97 266 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 PCSK2P16519 638 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 PTPN6P29350 595 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 STT3AP46977 705 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 RPS15P62841 145 aaKnown RBP18.83■□□□□ 0.61
SNRPA-201ENST00000243563 MRPS35P82673 323 aaKnown RBP18.83■□□□□ 0.61
SNRPA-201ENST00000243563 EEF1A2Q05639 463 aaKnown RBP18.83■□□□□ 0.61
SNRPA-201ENST00000243563 REP15Q6BDI9 236 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 PTPMT1Q8WUK0 201 aaPredicted RBP18.83■□□□□ 0.61
SNRPA-201ENST00000243563 GTF2H4Q92759 462 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 KAT2AQ92830 837 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 FGF11Q92914 225 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 GPR87Q9BY21 358 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 CXorf36Q9H7Y0 433 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 GPN2Q9H9Y4 310 aaPredicted RBP18.83■□□□□ 0.61
SNRPA-201ENST00000243563 MAP10Q9P2G4 905 aa18.83■□□□□ 0.61
SNRPA-201ENST00000243563 PRSS51A0A1B0GVH4 220 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 CCT8L1PA6NM43 557 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 RNASET2O00584 256 aaKnown RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 SOCS6O14544 535 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 CPSF4O95639 269 aaKnown RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 ATP1B1P05026 303 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 GSNP06396 782 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 ABCB1P08183 1280 aaPredicted RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 T-ENOLP0DO92 83 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 HOXB9P17482 250 aaPredicted RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 NTSP30990 170 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 GAB1Q13480 694 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 CYLC2Q14093 348 aaPredicted RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 PRICKLE4Q2TBC4 344 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 SFT2D3Q587I9 215 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 ATP1A1-AS1Q5TC04 95 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 ST13P4Q8IZP2 240 aaPredicted RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 ZNF321PQ8N8H1 164 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 FBXO27Q8NI29 283 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 RCN3Q96D15 328 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 CCDC115Q96NT0 180 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 ACSS1Q9NUB1 689 aaPredicted RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 GIMAP4Q9NUV9 329 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 MAT2BQ9NZL9 334 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 ANGPTL2Q9UKU9 493 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 PADI2Q9Y2J8 665 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 CFLARO15519 480 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 IFNA16P05015 189 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 NT5EP21589 574 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 OTX2P32243 289 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 MANFP55145 182 aaKnown RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 DUSP8Q13202 625 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 SPRED3Q2MJR0 410 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 ZNF628Q5EBL2 1059 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 TMEM107Q6UX40 140 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 MSRB3Q8IXL7 192 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 OR7G2Q8NG99 324 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 DGAT2Q96PD7 388 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 SLC25A23Q9BV35 468 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 PAIP1Q9H074 479 aaKnown RBP18.82■□□□□ 0.6
SNRPA-201ENST00000243563 CXorf21Q9HAI6 301 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 SEMA3GQ9NS98 782 aa18.82■□□□□ 0.6
SNRPA-201ENST00000243563 OR10H2O60403 315 aa18.81■□□□□ 0.6
SNRPA-201ENST00000243563 MC3RP41968 323 aa18.81■□□□□ 0.6
SNRPA-201ENST00000243563 OR4D2P58180 307 aa18.81■□□□□ 0.6
SNRPA-201ENST00000243563 SERTAD2Q14140 314 aa18.81■□□□□ 0.6
SNRPA-201ENST00000243563 KRT72Q14CN4 511 aa18.81■□□□□ 0.6
SNRPA-201ENST00000243563 PCOLCEQ15113 449 aa18.81■□□□□ 0.6
SNRPA-201ENST00000243563 MAPKAPK3Q16644 382 aa18.81■□□□□ 0.6
SNRPA-201ENST00000243563 TRMT12Q53H54 448 aaKnown RBP18.81■□□□□ 0.6
SNRPA-201ENST00000243563 ANXA8L1Q5VT79 327 aa18.81■□□□□ 0.6
SNRPA-201ENST00000243563 KIRREL2Q6UWL6 708 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms