RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CCDC3Q9BQI4 270 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 C9orf16Q9BUW7 83 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 IKZF5Q9H5V7 419 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 POLR1BQ9H9Y6 1135 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 SLC6A13Q9NSD5 602 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 EVA1BQ9NVM1 165 aa12.46□□□□□ -0.41
SLIRP-201ENST00000238688 TRBV23OR9-2A0A075B6M9 112 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 TMEM247A6NEH6 219 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 MYO1GB0I1T2 1018 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 H0YGG7 62 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 RTCAO00442 366 aaKnown RBP12.45□□□□□ -0.42
SLIRP-201ENST00000238688 DUX1O43812 170 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 CTSVO60911 334 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 TNFRSF21O75509 655 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 PRSS23O95084 383 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 C6orf47O95873 294 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 LDLRP01130 860 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 GSNP06396 782 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 CSNK2A2P19784 350 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-201ENST00000238688 CHI3L1P36222 383 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-201ENST00000238688 ARF3P61204 181 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-201ENST00000238688 TNFRSF17Q02223 184 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 SQSTM1Q13501 440 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 FAM53BQ14153 422 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 MYBPC3Q14896 1274 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 TAF11Q15544 211 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 GTDC1Q4AE62 458 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 GCNT6Q5T4J0 391 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 YOD1Q5VVQ6 348 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-201ENST00000238688 PRAMEF8Q5VWM4 474 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 PRAMEF7Q5VXH5 474 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 SAXO2Q658L1 398 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 IGF2-ASQ6U949 168 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 RNF111Q6ZNA4 994 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 CCDC80Q76M96 950 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 PDSS2Q86YH6 399 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 PLXDC1Q8IUK5 500 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 PLD3Q8IV08 490 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 ZZZ3Q8IYH5 903 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 CSNK1A1LQ8N752 337 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 OR56A1Q8NGH5 318 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 MIPOL1Q8TD10 442 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 RASSF5Q8WWW0 418 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 FIG4Q92562 907 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 NAT6Q93015 286 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 EME1Q96AY2 570 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 NAF1Q96HR8 494 aaKnown RBP12.45□□□□□ -0.42
SLIRP-201ENST00000238688 TRAPPC9Q96Q05 1148 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 NRTNQ99748 197 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 ASPSCR1Q9BZE9 553 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 AICDAQ9GZX7 198 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 ADPRHL2Q9NX46 363 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 UTS2RQ9UKP6 389 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 RAB26Q9ULW5 256 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 FAF1Q9UNN5 650 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-201ENST00000238688 SATB2Q9UPW6 733 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 AURKCQ9UQB9 309 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 DTNAQ9Y4J8 743 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 ZNF780BQ9Y6R6 833 aa12.45□□□□□ -0.42
SLIRP-201ENST00000238688 MN1Q10571 1320 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-201ENST00000238688 PPM1DO15297 605 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 PDE9AO76083 593 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 ZBTB11O95625 1053 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-201ENST00000238688 AGR2O95994 175 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 GBAP04062 536 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 MAGEA2P43356 314 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 ALDH9A1P49189 494 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 CCL7P80098 99 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 PRR5P85299 388 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 PLIN5Q00G26 463 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 MC1RQ01726 317 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 TLE3Q04726 772 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 GAB1Q13480 694 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 MPEG1Q2M385 716 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 PRTGQ2VWP7 1150 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 GRAMD1BQ3KR37 738 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
SLIRP-201ENST00000238688 C3orf38Q5JPI3 329 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 WDR74Q6RFH5 385 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-201ENST00000238688 IZUMO2Q6UXV1 221 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 RBM44Q6ZP01 1051 aaKnown RBP12.44□□□□□ -0.42
SLIRP-201ENST00000238688 B3GNT8Q7Z7M8 397 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 PATL1Q86TB9 770 aaKnown RBP12.44□□□□□ -0.42
SLIRP-201ENST00000238688 SPACA3Q8IXA5 215 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 SVOPLQ8N434 492 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 OR8K5Q8NH50 307 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 LZICQ8WZA0 190 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 TANKQ92844 425 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 CCDC74AQ96AQ1 378 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 FKBP10Q96AY3 582 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 MVB12AQ96EY5 273 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 ZNF578Q96N58 590 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-201ENST00000238688 RDH12Q96NR8 316 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 AMDHD1Q96NU7 426 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 NR1H4Q96RI1 486 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-201ENST00000238688 BBS4Q96RK4 519 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 KLHL31Q9H511 634 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 EPS8L2Q9H6S3 715 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 C3orf14Q9HBI5 128 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 TEX10Q9NXF1 929 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms