RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SLC18A2Q05940 514 aa12.68□□□□□ -0.38
NEK9-201ENST00000238616 COL28A1Q2UY09 1125 aa12.68□□□□□ -0.38
NEK9-201ENST00000238616 PLEKHN1Q494U1 663 aaPredicted RBP12.68□□□□□ -0.38
NEK9-201ENST00000238616 BORAQ6PGQ7 559 aa12.68□□□□□ -0.38
NEK9-201ENST00000238616 C12orf45Q8N5I9 185 aaPredicted RBP12.68□□□□□ -0.38
NEK9-201ENST00000238616 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
NEK9-201ENST00000238616 DAZLQ92904 295 aaKnown RBP12.68□□□□□ -0.38
NEK9-201ENST00000238616 TMBIM1Q969X1 311 aa12.68□□□□□ -0.38
NEK9-201ENST00000238616 MSANTD3Q96H12 275 aa12.68□□□□□ -0.38
NEK9-201ENST00000238616 SLC6A16Q9GZN6 736 aa12.68□□□□□ -0.38
NEK9-201ENST00000238616 PRELID1Q9Y255 219 aa12.68□□□□□ -0.38
NEK9-201ENST00000238616 MYO5AQ9Y4I1 1855 aaKnown RBP12.67□□□□□ -0.38
NEK9-201ENST00000238616 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
NEK9-201ENST00000238616 M0QX08 132 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 CX3CR1P49238 355 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 RCAN2Q14206 197 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 SLC43A2Q8N370 569 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 CERS5Q8N5B7 392 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 GOLM1Q8NBJ4 401 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 TMIEQ8NEW7 156 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 OR4F6Q8NGB9 312 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 PDCD1LG2Q9BQ51 273 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 ST6GALNAC5Q9BVH7 336 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 ITPAQ9BY32 194 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 CDH20Q9HBT6 801 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 MAFBQ9Y5Q3 323 aaPredicted RBP12.67□□□□□ -0.38
NEK9-201ENST00000238616 DOCK5Q9H7D0 1870 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 KIDINS220Q9ULH0 1771 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 FLRT2O43155 660 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 HNRNPDQ14103 355 aaKnown RBP12.67□□□□□ -0.38
NEK9-201ENST00000238616 C6orf141Q5SZD1 244 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 GLT8D1Q68CQ7 371 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 TRAM1L1Q8N609 369 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 WDSUB1Q8N9V3 476 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 OR51T1Q8NGJ9 327 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 RNF38Q9H0F5 515 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 MKLN1Q9UL63 735 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 BTNL10A8MVZ5 291 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 IGFBP1P08833 259 aaPredicted RBP12.67□□□□□ -0.38
NEK9-201ENST00000238616 RAB31Q13636 194 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 SMPDL3AQ92484 453 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 ZNF681Q96N22 645 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 ZDHHC2Q9UIJ5 367 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 PCDHGB6Q9Y5F9 930 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 LCHNA4D1U4 455 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 ITM2AO43736 263 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 OAS1P00973 400 aaKnown RBP12.67□□□□□ -0.38
NEK9-201ENST00000238616 ANXA8P13928 327 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 SQSTM1Q13501 440 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 CYBRD1Q53TN4 286 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 TICAM1Q8IUC6 712 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 DCUN1D3Q8IWE4 304 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 IL1F10Q8WWZ1 152 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 DTLQ9NZJ0 730 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.67□□□□□ -0.38
NEK9-201ENST00000238616 CKMT1AP12532 417 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 LANCL3Q6ZV70 420 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 GPR149Q86SP6 731 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 TMEM74Q96NL1 305 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 CAMK2AQ9UQM7 478 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 ERVK-19Q9WJR5 959 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 DOCK6Q96HP0 2047 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 FESP07332 822 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 TLE3Q04726 772 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 FAM214AQ32MH5 1076 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 LY6G5CQ5SRR4 150 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 BSCL2Q96G97 398 aaPredicted RBP12.67□□□□□ -0.38
NEK9-201ENST00000238616 EBF2Q9HAK2 575 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 MGAT4CQ9UBM8 478 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 ACSL5Q9ULC5 683 aa12.67□□□□□ -0.38
NEK9-201ENST00000238616 PON2Q15165 354 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 DEFB134Q4QY38 66 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 FAM205BPQ63HN1 556 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 OR2AP1Q8NGE2 309 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 NANOS1Q8WY41 292 aaKnown RBP12.66□□□□□ -0.38
NEK9-201ENST00000238616 HSH2DQ96JZ2 352 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 LMF1Q96S06 567 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 HNRNPABQ99729 332 aaKnown RBP12.66□□□□□ -0.38
NEK9-201ENST00000238616 PRODH2Q9UF12 536 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 ASB3Q9Y575 518 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 GLTPD2A6NH11 291 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 LRRN3E7EW58 273 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 H7C2Y5 167 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 RPS17P08708 135 aaKnown RBP12.66□□□□□ -0.38
NEK9-201ENST00000238616 FRKP42685 505 aaPredicted RBP12.66□□□□□ -0.38
NEK9-201ENST00000238616 AGTR2P50052 363 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 SYPL2Q5VXT5 272 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 ESX1Q8N693 406 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 TXN2Q99757 166 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 EFCAB11Q9BUY7 163 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 MOV10Q9HCE1 1003 aaKnown RBP12.66□□□□□ -0.38
NEK9-201ENST00000238616 KNG1P01042 644 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 IFNA1P01562 189 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 GKN3PP0CG01 181 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 PTPRCAPQ14761 206 aa12.66□□□□□ -0.38
NEK9-201ENST00000238616 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
NEK9-201ENST00000238616 SPTSSAQ969W0 71 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms